Gene Plav_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0123 
Symbol 
ID5456728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp135657 
End bp136124 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID640875683 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001411403 
Protein GI154250579 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.298276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA CCCTCAAAGT CAACGGCACC GCGCATACGC TCGATATCGA GCCCGAAATG 
CCGCTCCTCT GGGCGCTGCG CGACGAGCTC GGCCTCACCG GCACCAAGTT CGGCTGCGGT
GTCGCCGCCT GCGGCGCCTG CACGGTCTAT GTCGATGGCG TCGCCACCCG CACCTGCGTC
ACGCCGGTCG AGGCCGTGGA CGGCGCCGAG ATCGTGACCA TCGAGGGCCT CGCCGCCACA
TCCGGCGCGG CGGAAGGCAT GCTCGCCCCC GTCCAGCAGG CCTGGATCGA CGCCCAGGTC
CCCCAATGCG GCTATTGCCA GTCCGGCATG CTGATGGCCG TCTCCGCGCT TCTGGCGGAA
AACCCTCAGC CCACGGATGA AGACATCGAC GCGGCGATCA CCAATGTCTG CCGCTGCGGC
ACCTACCCGC GCGTCCGCGC CGCCATCCGT TCCGTCACCG CAGCCTGA
 
Protein sequence
MAITLKVNGT AHTLDIEPEM PLLWALRDEL GLTGTKFGCG VAACGACTVY VDGVATRTCV 
TPVEAVDGAE IVTIEGLAAT SGAAEGMLAP VQQAWIDAQV PQCGYCQSGM LMAVSALLAE
NPQPTDEDID AAITNVCRCG TYPRVRAAIR SVTAA