Gene Plav_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0106 
Symbol 
ID5453466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp117683 
End bp117991 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content55% 
IMG OID640875666 
Producthypothetical protein 
Protein accessionYP_001411386 
Protein GI154250562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.172416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTAA ATACCTTGTC TAATCCGGAT AAGAACCACG AGAGCCAGAT CGATAAAAAA 
ACAAAGGTCG ATGAGGCTCA GAAGGAGACT TTCCCCGCTT CCGATCCCCC CGCTTGGACG
AGCGGGGTGG CGTCTGCGGA GGAAGATGCG AAAAGAGCCG TCAGGAAGGC TGAGGAAGCT
GAAAGAGAGC GCAAGCATCG TGAAGACGAT GTCGATGAGA CGCTCGATGA AAGCTTCCCA
GCTTCCGATC CGCCCTCATG GAACGGTACT CATGCGGGCG ATGGGCACGA CCCCTCCCAG
AAGAAATAA
 
Protein sequence
MEVNTLSNPD KNHESQIDKK TKVDEAQKET FPASDPPAWT SGVASAEEDA KRAVRKAEEA 
ERERKHREDD VDETLDESFP ASDPPSWNGT HAGDGHDPSQ KK