Gene Plav_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0093 
Symbol 
ID5453538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp95540 
End bp96799 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content65% 
IMG OID640875652 
Productferric reductase domain-containing protein 
Protein accessionYP_001411373 
Protein GI154250549 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.852722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.641862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTT GGCAGATCGT CCTGACGATC ACCGCCGTGA GTTTCGGCCT CACCATGATC 
GAAATTCCCG CAGGCACGTG GCTCAGCACC GCGGCGCTCA GCCTCGCATG CGGCGTTGCC
GCGCTCTCGC TCATGGCGGC GGCCGCCATC CTTGCCGGCC GCTGGGGCTG GCCCGAGACC
GCCCTTGGCG GGCTGGACCG CGTTTACGCC GCTCACAAAT GGCTCGCCGT CTACGCGCTG
GCGCTCGCCT CGGTGCATTT TCTCTTCAAG GCCGGCGATC CCTCATGGGC GGCCGAAAGC
ATCATGGCAT TGCCGCAGGG CTGGACCCGC CTCGCGCGGC AGGCGAGCTT CGTCGCGCTG
ATGAGCATCG TCATTCTCGC GCTCAACCGG AACATTCCCT ACAGCACATG GCGCTGGTGG
CATCGCCTGT CGGGGCCGCT CTTCCTGATC GTGATCGTCC ATTGGCTGAG CATCAAATCG
CCCCTGGATC TCGTCAGCCC GGCCGGGCTG TGGCTGGCCG GCCTTTCCGC ACTCGGCATT
GCCGCCGCCG CCTACAAGCT GCTGCTCTAT CCGTTTCTCG CCCGCCACGC CGACTACCGC
GTTGTGAAGG TTCTGCGCGG ACCCTCGGCC GCCGAGATCG AGTTCGAGCC GGTAAAGCGC
GGCATCGATT TTCATGCGGG CCATTTCGGG TTCCTGCGCA TGAAGGTGGA CGGCCTGCGC
GAGCCCCATC CCTTCACGAT CGCCGCCGCT CCGGCACCGG ACGGCAGGAT CACCTTCGTG
ATCCGCGCAC TCGGTGATTA CACGGCGAAA CTGATCGCCG ATGTCGAGCC GGGCATGGAG
GCCGATGTCT ATGCGCCTTA CGGGCGCTTC GAACGCAAGC CCGATTGCCG CCGCGAGATC
TGGATCGGCG GCGGCGTCGG CATATCGCCG TTCATTGCCT GGATGCGGGA TGAGCAGAAA
GGCGGCTTCG CAAACGTATC GCTCTTCTAC TTCTTCACGC CCGGCCGTGT ATTTCCCGAC
ATCGATGTGT TGCGGAAGAT GGCCGAAGAA CGCGGCATCG AATTCGTTCC CGTTTCCGGC
GGTCCCGGGT CACGCGACTT CATCGACAGA TTCGGCGAGA TCGTCCGGGA TACGGCGCCG
GGCACGCCCG ACATCGCCCT CTGCGGTCCT GCGGGACTGC TGGAGAGCGT GCGCGGGCTG
GCCAGGGAGA ATGGCCTCGA TCCCGCCTGC ATCCGCCATG AACTCTTTCA GTTCCGTTGA
 
Protein sequence
MKPWQIVLTI TAVSFGLTMI EIPAGTWLST AALSLACGVA ALSLMAAAAI LAGRWGWPET 
ALGGLDRVYA AHKWLAVYAL ALASVHFLFK AGDPSWAAES IMALPQGWTR LARQASFVAL
MSIVILALNR NIPYSTWRWW HRLSGPLFLI VIVHWLSIKS PLDLVSPAGL WLAGLSALGI
AAAAYKLLLY PFLARHADYR VVKVLRGPSA AEIEFEPVKR GIDFHAGHFG FLRMKVDGLR
EPHPFTIAAA PAPDGRITFV IRALGDYTAK LIADVEPGME ADVYAPYGRF ERKPDCRREI
WIGGGVGISP FIAWMRDEQK GGFANVSLFY FFTPGRVFPD IDVLRKMAEE RGIEFVPVSG
GPGSRDFIDR FGEIVRDTAP GTPDIALCGP AGLLESVRGL ARENGLDPAC IRHELFQFR