Gene Plav_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0091 
Symbol 
ID5454547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp93572 
End bp93988 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID640875650 
ProductMerR family transcriptional regulator 
Protein accessionYP_001411371 
Protein GI154250547 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.266234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA CAATCACCGA CCTTGCCACC GAATTCGGCA TCACCCACCG CGCCCTCCGC 
TTCTATGAGG AAAAGGGTCT GATCGAGCCC GAACGTCAGG GCCAGGCCCG TCTCTATTCG
AAGCGCGAGC GCGCCCGCCT GCAGCTCATC CTGCGCGGCC GCGATGTCGG GCTGACGCTT
TATGAAATCC GCCAGATCCT CGATCTCTAT CAGTCCGGCA GCGGCTGCGA GGAGCAATAC
AGGCTCGCCC TTTCCCTCTT CCGCAAGCGC CTCGAAGCCG CAAGGCAATT GCGCGCGCGT
GTCGACGCCC AGATCGTCGA ACTCGAGGAA GCATGCCAGC GGCTCGACAG CCCGAAACTC
ATGCCCTCGA TTTCCCGGCA CAAGGAAACA AGGCAGCTCC GCACCGGCAC CCGCTAA
 
Protein sequence
MAYTITDLAT EFGITHRALR FYEEKGLIEP ERQGQARLYS KRERARLQLI LRGRDVGLTL 
YEIRQILDLY QSGSGCEEQY RLALSLFRKR LEAARQLRAR VDAQIVELEE ACQRLDSPKL
MPSISRHKET RQLRTGTR