| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0088 |
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| Symbol | |
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| ID | 5456715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 90359 |
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| End bp | 91024 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875647 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001411368 |
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| Protein GI | 154250544 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.383567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGGAG GCGTTGTGGA GGCGCAGGAG AAGGGCAAAG CCCGGGCGGC CCCCGCCAGG
CCGGCGGCGC GGGACCTGCT GCTGCAAGCG GCAAGCGAGG TCATGAGCGA GCGACAGACC
ATCGACGTGC CGCTGAGCGA CATCGCGGCG CGGGCGGAAG TGAACGTGGC GCTGGTCAGC
TATTATTTCG GCGGCAAGGA CGGGCTTTTG CTGGCGCTGG CGAAGCGCGA CGCGGCGACG
GCGCTGGGCG AGCTCGACCG GCTGCTGTCG CTCAATATCA GCCCCGAGGA AAAGCTCAGG
CGGCATCTCG CCGGCGTCAT CAAGACCTTC TTTCGCTATC CCTATCTCTA CAGGCTGCTG
GCGGCGCTGA TGCGCGATGC CTCGGACGAG ACGGCGCGGG ACATTGCGCA GTTCTTTGCC
CAGCCGCTGG CACGCGCGGC GCAGGGACTG ATGGAAGCGG GCATCGCAAA TGGCAGCATC
CGGCCGCTCG ATCCGCAGCT CTTCTATATT GCGGCGCTGG GCGCCTGCGA GCAGATCTTC
GCCAATCGCG CGATCCTGAA ATTCGTGCAT GGCATCGAGG AGATCGACGA GACGCTGCAG
CGCCGCTATG CCGAAGTGGT GCTGGAAACG CTGATGCGCG GCTATCTCGC GCCGCAGGGC
GACTGA
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| Protein sequence | MQGGVVEAQE KGKARAAPAR PAARDLLLQA ASEVMSERQT IDVPLSDIAA RAEVNVALVS
YYFGGKDGLL LALAKRDAAT ALGELDRLLS LNISPEEKLR RHLAGVIKTF FRYPYLYRLL
AALMRDASDE TARDIAQFFA QPLARAAQGL MEAGIANGSI RPLDPQLFYI AALGACEQIF
ANRAILKFVH GIEEIDETLQ RRYAEVVLET LMRGYLAPQG D
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