| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0085 |
|---|
| Symbol | |
|---|
| ID | 5454352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 86257 |
|---|
| End bp | 87141 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640875644 |
|---|
| Product | putative membrane protein, glycine-rich |
|---|
| Protein accession | YP_001411365 |
|---|
| Protein GI | 154250541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.917959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGAA ATTCAGCAAA GATAGCCTTG GCGGCAAGCG CGATGTTTCT CGTCGCTGCA
TGCAATTCGG ATGGTTCGTC GTTCGGCGGC GGCGGTGGCG GGGGCGGCGG CACGCCGAGC
TCCATCACGT CGCTCGGCGT AACGGGCGAA GGCGGCGTGA CGGAGACGCT CGGTATTGCG
GCCCTCACCG ATCCCCTGCT CGGCACGGAA GGCGTGCTCG GCGGCGGCGG CGAAGGCGCG
ATCGGCGGTC AATTGCCGGC AGAGCTGACC GATGCTATCG CGCCGCTCCG CGACGGGCTC
GCTCCCGTTG TGGATACGGT CGGCGGAAGC GTGCCCGTCG GCACGGTCAC GGACCAGATT
CCCTCCCTCG GCATCGGAGG TGAAGGCGGC CTCGTTTATG ACCTCGCCGG CCAGGACCCC
GTCGGCATGC TGCTTGGCGG CAATGGGACG GTTCCGATGC TTCTGGGCGG CGGCAATGAC
GGCGCGCTAG GAGATGTGGT CCCCGCGGGC GCGGTCCCCG GTCTTCCCGG CGGCGGCGAT
GGCGGCGATC CGCTTGCCCC GATCACGGAT CTCCTTGGCG GCGGCCTGCC CGGTCTTCCT
GGCGGCGGCG ACGATCCTCT CGCCCCCGTC ACCGATCTTC TCGGTGGTGC GGGTGGCCTC
GGCGTAACGG GCGATGGCGG CGTCCTCTCC AGCCTCCTGG GTGACGATCC TGTCGGCCCG
GCGATCACAC CGCTCGGCCC CGTTGCCGAT CTGCTCGGCG GCGGCAGCGA TGGATTGCTG
GGAAGCATCG TCCCGGCCGA TGCCCTTCCG GGCGGTGGCG GCGACGATCC GCTAGCACCC
GTCACCGATC TGCTCGGCGG CCTCCCGGCC TTGCCCGGCA GCTGA
|
|---|
| Protein sequence | MARNSAKIAL AASAMFLVAA CNSDGSSFGG GGGGGGGTPS SITSLGVTGE GGVTETLGIA
ALTDPLLGTE GVLGGGGEGA IGGQLPAELT DAIAPLRDGL APVVDTVGGS VPVGTVTDQI
PSLGIGGEGG LVYDLAGQDP VGMLLGGNGT VPMLLGGGND GALGDVVPAG AVPGLPGGGD
GGDPLAPITD LLGGGLPGLP GGGDDPLAPV TDLLGGAGGL GVTGDGGVLS SLLGDDPVGP
AITPLGPVAD LLGGGSDGLL GSIVPADALP GGGGDDPLAP VTDLLGGLPA LPGS
|
|---|
| |