| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0080 |
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| Symbol | |
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| ID | 5453868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 80820 |
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| End bp | 81593 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875639 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001411360 |
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| Protein GI | 154250536 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.479264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGA CGGTGGAGCA GAGCGGGTCT GCAAACACAT CCGGCACACA CGCGGCCTCG
CTACTGCTTG TGGATGACGA CCCGGATATT CGCGAAGAGA TGAGGACATA TCTCAGCGCG
AACGGCATGA TCATAACGGA GGCCGCCGAT GCTGCCTCCG CGCTCGAAAT GTTTTCAGGC
GGCAAGTTCG ATCTCGTCAT TCTCGACCTG CTGCTGGGCG CCGATAACGG CTTCGACGTG
TTGCGCGAAA TCCGGCAGAC ACATTCCACC CCCTGCATCA TGGTGACGGG ACAAAGCGAG
GCAACTGACA AGGTTGTCGG TCTCGAACTC GGCGCCGACG ATTATGTAGT GAAGCCCGTC
AACCTGCGGG AGCTGCTTGC GCGCATCCGG GCGCTGTTGC GCAGGACGGC AAATTCCGGC
GGCTCGGGAG CGCGGACAAA CGCCGGTGCG GCGGATAGCG ACGAAGCCGC CGCGCAATGG
AAGTTCGACC CGCATCGCCG CCGCCTCTGC GCGCCGGACG GCGCGCTGGT GCCGCTGACG
ACGGCGGAAT GCGACCTGCT GATCGAACTG GTGGCGCATG AAGGAAACCC GCAGACAAGG
GAAGAACTCT GCCGCCGCGT CTTCAACCGG CAGTGGCAGC CTTACGACCG CAGCCTGGAC
AGCATCGTGG TGAAGCTGCG GCGGAAACTC GAACCCAATC CTGATCATCC GATGGTCATC
AAGACCATTC GCGGCAAGGG CTATCTGTTC ACGGGGTTTC CGAGCGGCGA CTGA
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| Protein sequence | MAMTVEQSGS ANTSGTHAAS LLLVDDDPDI REEMRTYLSA NGMIITEAAD AASALEMFSG
GKFDLVILDL LLGADNGFDV LREIRQTHST PCIMVTGQSE ATDKVVGLEL GADDYVVKPV
NLRELLARIR ALLRRTANSG GSGARTNAGA ADSDEAAAQW KFDPHRRRLC APDGALVPLT
TAECDLLIEL VAHEGNPQTR EELCRRVFNR QWQPYDRSLD SIVVKLRRKL EPNPDHPMVI
KTIRGKGYLF TGFPSGD
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