Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0074 |
Symbol | |
ID | 5455868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 75821 |
End bp | 76768 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640875633 |
Product | type II secretion system protein |
Protein accession | YP_001411354 |
Protein GI | 154250530 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.557722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.8398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTGC TTGACGGCCT GACATGGATG ATCGCGGGAC TTGCCCTGGC GGCAGGCGCG CTCGTCTTTG TCTCGTCACT TACGCTTCTC GTCCGCCATC GCGAGGTTTC GGCCCGGCTG TCGCTTCTCT TCACGCCCGA ACGTGAATAC GGCACGCTGA CGGAGACGGC ACTTGTCCTG CTGGAACGTC TCGGCCGCCG CATAGAAGGA ACGCGCGTCA ATCGGGAGCT TCGGCAGCTT GCTCTCCGCG CCGGCTTCTT CCAGCCGTCC TCCGTTTATG TCTTCGTCGC CTTGAGATAT GGCGTCGCCT TGGCGATCGG CCTTGTCATC GTCCTCGCCC GTTCGGATGG CGGTGTACCC GCCGTCGCCG ACATTCTCTA CGGCGTTTTC TTCGGATATC TTTTCTACCG CTATGTCCTC ATCGCGCTCG GCGTCTATGC GGATCGCCGC GCCAACACCA TTCGCCGCGA GCTGCCGCCT GTTCTCGACA TCATGTTGAT GGCGCTCGAC GCGGGAGTGA GCGTCGACCA GTGCATGCGC TACGTGGCAG GTGTCGTCCG CCGCACCGCG CCCGTCACCG GCAAGGTATT GCGCCGCCAC ATAGCCGACA TCGACGCAGG CATGCCCTAT GACGCCGCAT TGGATCGCCT GGGCCAGCGG CTGGGTCTCG ACGAAGGGCA GGATCTTGCG GCGACCATCA AGCAGGCCTT GTTTCAGGGC GGCGAGCTCA GCACTACCTT GCGCCGCTTC TCCGTGGATC TGTCCGACAA GCGCATGGGC ATGGCGCGCG AACAGGTTGG CCGCAAGGCG CCGCAGCTCA CCCTGGTGAT GATATTGTTT TTCATGCCGG TGCTGTTGAT CGTGCTGGCA GGCCCCGCAG TGGTCACGCT GCAGGGCGCG CTGGAGGTTG CGGGCGAACA GATAGGCAAG CGGGGCAACG CGCCATGA
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Protein sequence | MAVLDGLTWM IAGLALAAGA LVFVSSLTLL VRHREVSARL SLLFTPEREY GTLTETALVL LERLGRRIEG TRVNRELRQL ALRAGFFQPS SVYVFVALRY GVALAIGLVI VLARSDGGVP AVADILYGVF FGYLFYRYVL IALGVYADRR ANTIRRELPP VLDIMLMALD AGVSVDQCMR YVAGVVRRTA PVTGKVLRRH IADIDAGMPY DAALDRLGQR LGLDEGQDLA ATIKQALFQG GELSTTLRRF SVDLSDKRMG MAREQVGRKA PQLTLVMILF FMPVLLIVLA GPAVVTLQGA LEVAGEQIGK RGNAP
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