| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0073 |
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| Symbol | |
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| ID | 5455664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 74940 |
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| End bp | 75815 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640875632 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001411353 |
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| Protein GI | 154250529 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.53899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.541606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGCCT TGTTTATGTT GCGCCGCGCG CGCCGCGACA TGGAGGTGAA CCTTCGTCTC
GGCGATGTCG TCGGCCGGCC GCACGGCGCC GAAGCGCCGG CGCTTCTCTT CGGCGGCTGG
CCGGACCCGA CGCGCCTCCT GCCGACCGTC GCCAGCAACC GTCTCTATCA AGCCGGCATC
GAATTGCCTG CCGACCGGCT CACGGCGATA CTGATATTCG TTCTATGCGT CTGGTCCTCG
CTCGTCATCC TCTCCGGCTT GATCGTCGCG ACTGTCGTGG TTCTCAGTTC TCTTCTCGTC
GTCGCCGCCA TTATCGACTA CCGGGCAAGG AAGCGCATGA ACGCGCTTTC CGACGCGATG
CTCGGCTATT TCGATCGTGT CCGTCAGTTG CTTGTTGTCG GAAACAGCCT CTCTGTTGCG
CTGGCCCGCG CCACGCAGTC CTCGCCCCCC ATCGTCATCG AGTTCTTCTC GCCCACGATC
CGGCGGATCG CAAATGGTGC CGGCGTGGCC GAGAGCGTCA ACCAGCTCGC CGACGAAACG
GATCTCTATG AACTCCGCCT CTTCGGAACG GCGATAGAAA CAAATCTCCG GTTCGGCGGA
TCGCTTACCT CGATCCTGTC AAATCTGATC GACAATATTC GCCGCCGTGC GGCTGTCATG
CGCGAGGTGC GGGGCAGCAC GTCGCAGATT CGCGCCAGCG CCTGGGTTCT TGGCCTGCTG
CCGATGATAG TCGCTTCGGT CGTCATGGTG CAAAGCACGG ACTACATGCG CTGGTTCATC
GAGGAGCCGG CGGGCAGGAA GCTTCTGATC TATTGTGCAT TGTCGCAGAT ATTCGGCGCA
TTCATGATGC GCAATGTCGT TCGCGCGAAT TATTAG
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| Protein sequence | MAALFMLRRA RRDMEVNLRL GDVVGRPHGA EAPALLFGGW PDPTRLLPTV ASNRLYQAGI
ELPADRLTAI LIFVLCVWSS LVILSGLIVA TVVVLSSLLV VAAIIDYRAR KRMNALSDAM
LGYFDRVRQL LVVGNSLSVA LARATQSSPP IVIEFFSPTI RRIANGAGVA ESVNQLADET
DLYELRLFGT AIETNLRFGG SLTSILSNLI DNIRRRAAVM REVRGSTSQI RASAWVLGLL
PMIVASVVMV QSTDYMRWFI EEPAGRKLLI YCALSQIFGA FMMRNVVRAN Y
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