| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0071 |
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| Symbol | |
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| ID | 5455559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 72457 |
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| End bp | 73650 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875630 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001411351 |
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| Protein GI | 154250527 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.623542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGTG TTCTCCTCAT ATGTGGCGAC AAGCCGTTGG CAGCGCAGGT CAAGCAGGCG
CTTGATTCGA CGTCGACCGT CATGTCGGCC GATCCTGCAA TCGACAATGT GCAAGATGTG
GCCGGACAGT TCCGGCCCGA GATGGTTCTG GTGGATAGCG ATATCCGCCT GGGCGCGCGG
ACCGCGTTCG AGCGGCTTTC CATCGTGCGT GAATGGTTCC CCGACCTGCC GATGGTCGTC
ATCGGAAACG AGTCGGGTGC TCATCTGATT CTGACCGCCA TGCGTGCAGG CGCACAGGAT
TTTCTCGACC GCGATGCGGC GGATGAAGAT GTCCGCAACG TGGTGGCACG CCATATCGCC
AGCGGGCGCC CGCGCGGCGG ATCCTCGCAT ATCGTCAGCG TTCTGAGTGC CGGCTCCTGC
GAAGAGGATG GCGACTTTGC CGTCAATCTC GGTGTATCCG TGGCCGCCGC GCGTCCGCGA
GAGGGGATAC TTCTCGTCGA TCTCGCTTTG CCGGCCAGCA ATACCGCCAT ATCGCTCGGC
CTTGAGCTTT CCTTTCGGGT GAAGGAAGCG GTAAAGGAAA TGTCCCGGCT TGACCGTGCG
CTTCTCGATT CCGCGCTAGC GCGCTGTCCG CGGTCGGGCC TCTATGTATT GCCTCTCGCG
GTTCACGGGG ATGCGGAAGA CTGGCTGGTG AGCGTGCAGG ACCTCCGGGC GCTGCTCGAA
ATATGCCAGG CTCTTTATGA CGTGGTGATC GTCTCCTACG GTCCCTTCTC GCGGCAGGAA
GAACTTGTCG GCCTTCCCGG CGATGGCGCG CTTTTCTTCC TTCCCTGCAA TCAGCGCTTC
ACCTCGATAA AGGGTGCCGC CGAAATGCTC CGCTTCGTGC GGCAGCTTCG GTCCGACAAT
GGCGAGCCGG TTCTCGTCGT TCATGAGTTC GCACCCGGCA TGGCGCCGGA CGCCACGGGC
ATCAAAAGCG CCGTCGGCGC CAGACAGGCA ATTGAACTTC CCGTGCGCTG GCATCAGCTC
GCGGAAAGCG TAAACCGGGG AGAACCGCTC GGGCTCGACA GCTCCACGCC TTACGCACAA
AGTCTGTCCC GCCATCTCGC GAACCTCTCC CTTCTGCCGC AACAGGCAGT GGATGACGAG
CGCAGACAGC CGATCAAGGC CTGGGCCCGG AAACTTCTCG GAGTGCTGCC ATGA
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| Protein sequence | MHRVLLICGD KPLAAQVKQA LDSTSTVMSA DPAIDNVQDV AGQFRPEMVL VDSDIRLGAR
TAFERLSIVR EWFPDLPMVV IGNESGAHLI LTAMRAGAQD FLDRDAADED VRNVVARHIA
SGRPRGGSSH IVSVLSAGSC EEDGDFAVNL GVSVAAARPR EGILLVDLAL PASNTAISLG
LELSFRVKEA VKEMSRLDRA LLDSALARCP RSGLYVLPLA VHGDAEDWLV SVQDLRALLE
ICQALYDVVI VSYGPFSRQE ELVGLPGDGA LFFLPCNQRF TSIKGAAEML RFVRQLRSDN
GEPVLVVHEF APGMAPDATG IKSAVGARQA IELPVRWHQL AESVNRGEPL GLDSSTPYAQ
SLSRHLANLS LLPQQAVDDE RRQPIKAWAR KLLGVLP
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