Gene Plav_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0067 
Symbol 
ID5456415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp66777 
End bp67808 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID640875626 
ProductPE-PGRS family protein 
Protein accessionYP_001411347 
Protein GI154250523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.494555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCG TCGTCTGTCT GGGGCTCGCC GCGTGCGGAA CGGACAAAAT CGCCATGTCG 
TCGGAAGTGG GCGGTGGGGG CAGCAGCCGG ATCGTCGCCG CCCGCGCGGA TAATTCCGGT
GGTGGCGGCG CCGGGGCGGG AGGAAGCGGC GGCCTGGGCG TCACCGGCGG CGGCGGTGCG
CTCGACAACA TCGTCGGCAC GGATCCCGTC GGCGGCTATG TCGACGAGCT GCTCGGGCCG
GGCAATCCCG TCACTGCCAT TCTCGGTTCC TCCGGCGGTT CAGGTCTCGT TCCCTCCGCT
GCCGCCATGC TTGCGGGCGA TCCCGATGCG GAGGTAACAG GATTGGGCAT TGCGGGCGAG
GGCGGCCTTC TGGCCGATCT TGCAGGCACG GATATGCTTG GTGGAATGCT CGACACCGGG
GGGCTCGTCG GCGCCAGCAT TGCCGGCGGC AATGACGGTC TTCTCGGGGC ATTGCTGAAC
AGCCAGGCGG CAAACCCGCC GCTCGCGCCC ATTGCTGGCC CGGTTGCATC GGCACTGCCC
GTTTCGGTCC TGGCGGACGC CCTTGCCGGG CTGCCCGCGC TGGGAGTGAC GGGCAGCGGC
GGGCTGGTCG CGGATCTGAC GGGCACCGAT GTGGCGGGCA ATCTGCTGGG TCAGAGCACG
CCGGCTGGTG GCGGCAATGG CGGTCTTCTT GGAAATCTCG TGCCTGCGAG CCAGCCGCCG
CTGGGTCAGG TCGGCCAGGC GGGAACGGGT CTTCTCAACA TAGTGGGCGG CAATGAGCCA
AGCCCGGTTT CGGGCATTCT CGCGCCAGCC ATGCCCGTGC TCGACAACAT CCTTGGCACC
GGAGCCGGCA CCATCGGTGG TGCGATTGCG CCCGTCACAG GCGCGCTGAG CGGCCTGCCG
GTGGGCGGAA CACCGTCGTC TGGCGGCTCT TCTCCGGCTC CCGCTCCTGC TCCTGCTTCC
GGCCCCCTCG CGCCGGTCAC AGGTATTGTC GGCGGCCTGC CCATCGTGGG CGGTCTTCTG
CGCGGACAAT AG
 
Protein sequence
MASVVCLGLA ACGTDKIAMS SEVGGGGSSR IVAARADNSG GGGAGAGGSG GLGVTGGGGA 
LDNIVGTDPV GGYVDELLGP GNPVTAILGS SGGSGLVPSA AAMLAGDPDA EVTGLGIAGE
GGLLADLAGT DMLGGMLDTG GLVGASIAGG NDGLLGALLN SQAANPPLAP IAGPVASALP
VSVLADALAG LPALGVTGSG GLVADLTGTD VAGNLLGQST PAGGGNGGLL GNLVPASQPP
LGQVGQAGTG LLNIVGGNEP SPVSGILAPA MPVLDNILGT GAGTIGGAIA PVTGALSGLP
VGGTPSSGGS SPAPAPAPAS GPLAPVTGIV GGLPIVGGLL RGQ