Gene Plav_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0065 
Symbol 
ID5456089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp64350 
End bp64739 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content63% 
IMG OID640875624 
Productresponse regulator receiver protein 
Protein accessionYP_001411345 
Protein GI154250521 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.909835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGC TCATCTATGA CGATGACGAG GACCTCGCGC AGGAATGCGC GGACGCTCTC 
ACGCGGCGGG GCCACAAAAC GACAACGCGG AACGGGCAAG CGAATTTCTC CGCGCTGGTG
GCGGCGTTCG AGCCCGACCT GATCCTGCTC GATGTGCATA TGCCGGAATT CAACGGCTTC
GAAGCATTGC AGGCGCTCGC GCGGAACACC CGGAAGAGCG ATATTTCGGT CATCATGATG
TCCGGCGCGC GGGACAATCT GCTCGGCGCC ACGACGGCCT TCTGCGAGGC GCATGACATA
GGTCTGCTCG GCACCTTGCC AAAGCCCTTC GGTCTGAAGG AGCTGGACGA GCTTCTGGAC
AGGGCGGGAG CCGTTCGGCC GGCTTCCTGA
 
Protein sequence
MRVLIYDDDE DLAQECADAL TRRGHKTTTR NGQANFSALV AAFEPDLILL DVHMPEFNGF 
EALQALARNT RKSDISVIMM SGARDNLLGA TTAFCEAHDI GLLGTLPKPF GLKELDELLD
RAGAVRPAS