Gene Plav_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0036 
Symbol 
ID5454827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp40109 
End bp41215 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content63% 
IMG OID640875595 
Productbiotin synthase 
Protein accessionYP_001411316 
Protein GI154250492 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCG AAACCTTCCG ACCGGCCAGA GAGTGGTGCT TGCCCATGAC CATCCAGACC 
CGCATCGAAG AGACGAAAAC AAGGGACATC GTGACCGCGC GCACCGACCC CGGCGCGCTG
CGGCATGACT GGACGCGGGA AGAGCTGCAG GCGCTTTTCG ACCTGCCCTT CAACGATCTT
CTCTTCGAGG CGCAGCTCGT TCATCGCCGC TGGTTCAAGG CCGACGAAGT GCAGATGTCG
ACGCTCTTGT CGATCAAGAC CGGCGGCTGC CCGGAAGATT GCGGCTATTG CGCGCAAAGC
TCGAAATTCG ACACCGGCCT CAAGGCGTCG AAGCTGATGG AAGTCGAGAA GGTGCTGGCG
GAAGCGCGCA AGGCGAAGGA AGCGGGCGCC ACGCGCTACT GCATGGGCGC CGCCTGGCGC
GAGCCCAAGG ACCGCGACAT GGACATGGTC TGTGCCATGG TCGAGGGCAT CAAGGACATG
GGCATGGAAA CCTGCATGAC GCTCGGCATG CTTTCCGGCC AGCAGGTGCA CCGCCTCGCG
CAGTCGGGCC TCGACTATTA CAACCACAAT ATCGACACGT CGGAAGAATA TTATCCGAAA
GTCATCAGCA CACGGACCTA TCAGGACCGG CTCGAAACGC TGGAGCGGGT GCGCAATGCA
GGCATCAATG TCTGCTCGGG CGGGATCGTC GGCATGGGCG AGAGCCCGTC GGACCGGATC
GGCATGCTGA TGACGCTCGC CAATCTGGAA GAACATCCGC AGAGCGTGCC GATCAACATG
CTGATGCCGG TCGAAGGCAC GGCGCTCGGC GCGAGCGAGA AGATCGACCC GATCGACTTC
GTGCGCCTGA TCGCCGTCGC GCGCATCGCC ATGCCGCAAT CGGTCGTGCG TCTTTCGGCG
GGCCGCGAGC ACATGTCGGA AGAGACGCAG GCGCTCTGCT TCCTTGCCGG TGCGAACTCG
ATCTTCATCG GCGAGAAGCT GCTCACCACG AAGAACCCGG AAGCCGACAA GGACCAGCGG
CTGTTCGCGA AGCTCGGCAT CAGGTCGATG CCGGCGCATA GCTGCCCGTC GGAGAAGGAC
GTTTCAGCCG ACCGCAAGGC CGGCTGA
 
Protein sequence
MLPETFRPAR EWCLPMTIQT RIEETKTRDI VTARTDPGAL RHDWTREELQ ALFDLPFNDL 
LFEAQLVHRR WFKADEVQMS TLLSIKTGGC PEDCGYCAQS SKFDTGLKAS KLMEVEKVLA
EARKAKEAGA TRYCMGAAWR EPKDRDMDMV CAMVEGIKDM GMETCMTLGM LSGQQVHRLA
QSGLDYYNHN IDTSEEYYPK VISTRTYQDR LETLERVRNA GINVCSGGIV GMGESPSDRI
GMLMTLANLE EHPQSVPINM LMPVEGTALG ASEKIDPIDF VRLIAVARIA MPQSVVRLSA
GREHMSEETQ ALCFLAGANS IFIGEKLLTT KNPEADKDQR LFAKLGIRSM PAHSCPSEKD
VSADRKAG