| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0027 |
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| Symbol | |
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| ID | 5455109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 30314 |
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| End bp | 32665 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875586 |
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| Product | RND superfamily exporter |
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| Protein accession | YP_001411307 |
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| Protein GI | 154250483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGAT TTCTCGAAAA TGTTGTCTTC CGGCTCCGCG CGCTGATCCT GCTGGGCCTT
CTGGTCTTCA CGGTCATTGC CGGATATTAC GCGACGGGCC TGCGCATGAC CGCCGGCTTC
GACAAGCAGC TTCCGGTCGG CCACGAATAT ATTCAGACGT TCCAGGAATA TCGCGACCAG
CTCTTCGGCT CGAACCGCAT CATCGTGGTG CTGGCGCCGA ACGAAGGCAC GATCTGGACC
CGAGAGTTCT TCAAGACCTA CAAGGAACTC ACCGACGACA TCTTCTTCCT GCCCGGCGTT
TCCCGCCACA CGGTGACATC GCTCTGGACG CCCAACACCC GCTACATTGA AATCACCGAG
GACGGCATCA GCGCCGACGA CGTCATTTCC GGCCGCGTCA CCGCCGACTC GATGACACCC
GCGAACCTTC AGAAAATCCA GAGCAACGTC ATTCGCGGCG GCTTCGTCGG CCGCCTCGTC
GCCGACGACT TCCAGTCCGC CATGGTCGTC GCCGAGTTGC AGGATTACGA TCCTTCGACC
GGCCAGCCGC TCGACTATTT CGACCTCGCC GCCAAGCTCG AAAAGCAGAT CCGCGACAAA
TACGAGAGCG ATCAATACAC CGTCCGCATC ATCGGCTTCG CCAAGCTGAT CGGCGACATC
GCCGACGGCG CCGGCACTGT CGTGAAGTTC TTCATCGTCG CCTTCATCTT GACGGCGCTG
GCGCTTTATC TCTATTCGCG CTCGGTGCTG CTGACATCGG CAACGCTCTT TGCCTCGCTG
ACCTCGGTGG TCTGGCAATT CGGTCTGCTC AATCTGCTCG GCTACGGTCT CGATCCGCTG
GCGGTGCTGG TGCCCTTCCT CGTCTTCGCC ATCGGCGTCA GTCACGGCGT GCAGCAGATC
AACCTCATTA CGGCCGAGAT CAGCGCCGGC GCCAATGCCG AACAGGCGGC GCGCGTCGCC
TTCTCGCGTC TTCTGGTGCC GGGCTCCATG GCCCTCATCA CGACGCTGGT CGGCTTCGGC
ACGCTCTACC TGATCCCCGT ACCGATGATC CGCGAACTCG CCATCACCGC CTCGATCGGC
GTGGTGCTGA AAATCGCGAC CAACCTCATC ATGCTGCCGC TTCTCGTCAG CTATCTGAAG
TTCGGCGAGA ACTTCCGCGA CCGCGTGACG CGTTCGCGCG AAGTGCGCCT CAAGATCATG
CGCGGGCTCG GTTTCGTGGC CAGTCCGCGC TGGGCCGTCA TCATCCTGAT CGGCTCGACG
ACGCTCTTCG GCATCGCCGT CTACCAGGGC ATGAACCGCC ATGTCGGCGC GCTTCACGCC
GGTGCGCCGG AGCTTCGGCC CGACGCGCGC TACAATGTGG ACTCGACGGA GATCGCCAAC
AGCTTCGCGC TTGGCCTCAA CGTGCTGACG GTGGTGGTCG AAACGCCGCC GGACAGCTGC
GTGACCTATT CCTACATGAA ATATCTCAAC CAGTTCTCCT GGGCGATGCA GAACGTCCCC
GACGTGACGC TCGTCGTCTC GCTGCCCTTC GCGATCAAGG GTTCGGCGGC CGGCTGGAAC
GAGGGCAACC TCAAATGGAA GGATATTCCG CGCAACCGTC CGGCGCTGGC GCAGGCGTCG
AACACGGTGC CGGGTGCGGG CGCACTCTAT AACCAGACCT GCACCATCCT TCCGCACATG
ATCTATCTGA AGGACGCGAA GGCGACGACC ATCAAATCCG CCATCAATGC GGTGAAGGAA
TGGCGCGCCG CTCATCCGAT GGAAGGCGTC AATATTCGCC TCGCTTCCGG CAATATGGGC
GTGCAGGCGG CGGTGAACGA AGAGATCACC GAAACCGAAC TGCCGATGAT GATGTGGGTC
TATGCCGTCA TCATCGCGCT CGTCACGCTC ACCTATCGCG ACTGGCGGGC CGTCATCGCC
TGTTGCCTGC CGCTCACCTT CGGCACCTTC TTCGGCTACT GGTTCATGGA AGTGCTGCAG
ATCGGCCTGA CCGTGGCGAC GCTGCCGGTG ATGGTGCTCG CGGTCGGCAT CGGCGTCGAC
TACGCCTACT ACATCTACAA CCGCATCCCC TATTACCTCG GCGAGGGGAT GAACGTGACC
GACGCTTTCC GGCAGGCGCT CCTCGAAACC GGCATGGCGA CCTTCTTCAC GGCGCTCACG
CTGGCGGTCG GCGTTTCCAC CTGGGCCTTC TCGGATCTGA AGTTCCAGGC GGATATGGGC
CTGCTGCTTT CCTTCATGTT CATGGTCAAC ATGATCATGG CGATCACGGT GCTGCCGGCA
CTCGCGGTCG TTCTGGAAAT GCTGTTCCCG CGCAAGCGTC CCGTCGCCCG CCAGAGCGCG
CCGGTTCACT GA
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| Protein sequence | MIGFLENVVF RLRALILLGL LVFTVIAGYY ATGLRMTAGF DKQLPVGHEY IQTFQEYRDQ
LFGSNRIIVV LAPNEGTIWT REFFKTYKEL TDDIFFLPGV SRHTVTSLWT PNTRYIEITE
DGISADDVIS GRVTADSMTP ANLQKIQSNV IRGGFVGRLV ADDFQSAMVV AELQDYDPST
GQPLDYFDLA AKLEKQIRDK YESDQYTVRI IGFAKLIGDI ADGAGTVVKF FIVAFILTAL
ALYLYSRSVL LTSATLFASL TSVVWQFGLL NLLGYGLDPL AVLVPFLVFA IGVSHGVQQI
NLITAEISAG ANAEQAARVA FSRLLVPGSM ALITTLVGFG TLYLIPVPMI RELAITASIG
VVLKIATNLI MLPLLVSYLK FGENFRDRVT RSREVRLKIM RGLGFVASPR WAVIILIGST
TLFGIAVYQG MNRHVGALHA GAPELRPDAR YNVDSTEIAN SFALGLNVLT VVVETPPDSC
VTYSYMKYLN QFSWAMQNVP DVTLVVSLPF AIKGSAAGWN EGNLKWKDIP RNRPALAQAS
NTVPGAGALY NQTCTILPHM IYLKDAKATT IKSAINAVKE WRAAHPMEGV NIRLASGNMG
VQAAVNEEIT ETELPMMMWV YAVIIALVTL TYRDWRAVIA CCLPLTFGTF FGYWFMEVLQ
IGLTVATLPV MVLAVGIGVD YAYYIYNRIP YYLGEGMNVT DAFRQALLET GMATFFTALT
LAVGVSTWAF SDLKFQADMG LLLSFMFMVN MIMAITVLPA LAVVLEMLFP RKRPVARQSA
PVH
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