Gene Plav_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0025 
Symbol 
ID5456616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp27133 
End bp28401 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content62% 
IMG OID640875584 
Productcytochrome P450 
Protein accessionYP_001411305 
Protein GI154250481 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.498673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.104962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CAGCGGTAAA ATACGAAGCC GATGAGGCAC GCGACGAGGC CTATTCGATC 
CCCCTCGCGG AGATCAATGT GGCCGACCCG TCGCTCTTCC GGGATTACAA GATGTGGCCC
TATTTCGAGC GGCTGCGCGC GGAGGCCCCG GTTCACTACA GCCAGGGCAA TGAGGACACC
GGGCCCTACT GGTCGGTGAC GCGCTACAAC GACATCATGT CGGTGGATAC GAACCACCAG
GTCTTCTCCT CGGAAGGCGG CATCACGCTG CGCGACCAGG ACGAGGACTT CAAGCTGCCC
ATGTTCATCG CCATGGACCC GCCCAAGCAT GACGACCAGC GGAAAGTCGT GAGCCCCATC
GTGGCGCCCG GCAACCTGGC GAAGCTCGAA GGCACGATCC GCGAACGCGC CGGCAAGATC
CTCGACGAAT TGCCGACGGG CGAGCCGGTC GACTGGGTCG ATCGCGTCTC CATCGAACTC
ACGACGCAGA TGCTGGCGAC GCTGTTCGAC TTCCCCTTCG AGGAACGCCG CAAGCTGACG
CGCTGGTCCG ACGTTGCGAC GGCCACGGAA GAATCCGGCA TCATCGAATC CGAGGAGCAG
CGCCGCGCCG AACTTCTCGA ATGCGCCGAA TATTTCATGG GTCTGTGGAA TGAGCGCGTG
AACGCGCGTG AGCCGGGCAA CGACCTCATC TCCATGCTCG CGCATGGCGA GTCGACCCGC
AACATGGACA AGATGGAATA TCTCGGGAAC CTGATCCTGC TGATCGTCGG CGGCAACGAC
ACGACGCGCA ACTCGATCTC GGGCGGCCTC TACGCGCTCA ACAAGTTCCC GGACCAGTAC
AAGAAGCTCC TCGCCAATCC GGGCATCATT CCGAACATGG TACCGGAAAT CATCCGCTGG
CAGACGCCGC TCGCCTATAT GCGCCGCACC GCGCTGCAGG ACGCGGAAGT CGGCGGCCAG
ACGATCCGCA AGGGTGAAAA GGTTGCGATG TGGTATGTCT CGGGCAACCG CGACGAAAGC
GTGATCCAGA ACCCGAACGA ACTGGTGATC GACCGCGAAC GTCCGCGCCA GCACCTCTCC
TTCGGCTTCG GCATTCACCG CTGCGTGGGC AACCGTCTCG CCGAGATGCA GCTCCGCATC
ATCTGGGAAG AAATCCTGAA GCGTTGGGAC CAGCCGATCC GTGTGCTGAG CGAGCCGCAG
CGCGTGCATT CGAGCTTCGT GAAGGGCTAC GAAAAAATGA TGGTCGAGTT GCCGAAGCGC
AAGCACTGA
 
Protein sequence
MSDAAVKYEA DEARDEAYSI PLAEINVADP SLFRDYKMWP YFERLRAEAP VHYSQGNEDT 
GPYWSVTRYN DIMSVDTNHQ VFSSEGGITL RDQDEDFKLP MFIAMDPPKH DDQRKVVSPI
VAPGNLAKLE GTIRERAGKI LDELPTGEPV DWVDRVSIEL TTQMLATLFD FPFEERRKLT
RWSDVATATE ESGIIESEEQ RRAELLECAE YFMGLWNERV NAREPGNDLI SMLAHGESTR
NMDKMEYLGN LILLIVGGND TTRNSISGGL YALNKFPDQY KKLLANPGII PNMVPEIIRW
QTPLAYMRRT ALQDAEVGGQ TIRKGEKVAM WYVSGNRDES VIQNPNELVI DRERPRQHLS
FGFGIHRCVG NRLAEMQLRI IWEEILKRWD QPIRVLSEPQ RVHSSFVKGY EKMMVELPKR
KH