Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0018 |
Symbol | |
ID | 5456310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 21475 |
End bp | 22101 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640875577 |
Product | two component Fis family transcriptional regulator |
Protein accession | YP_001411298 |
Protein GI | 154250474 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.594546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0172011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCAT CCGGCCTAGA ATCCGGCCAA TTCCGACAGA GATTGGACGA CCAAGTGACA GATTCTGCCG AGGCGCCCGA GGGCGAGACC CCCACCATTC CCGAAGACCG CACCTTGCTG CTGGTCGATG ACGACATCCC CTTTCTGACG CGGCTTGCCC GGGCGATGGA AGGCCGCGGC TTCGAGGTGA CGACCGCCAG CACAGTGAAG GACGGCAAGG AGCTTGCCCG CTCGAAAAAG CCGGGCTTCG CGGTTGTCGA CATGCGGCTC GAAGACGGCA ACGGGCTCGA CGTGGTGGCG ACGCTGGAAG AGGTGCGGCC CGATGCGCGC ATCGTCGTGC TGACCGGCTA CGGCAATATC GCGACGGCGG TGACGGCGGT GAAGCTCGGC GCGGTCGACT ATCTCGCGAA GCCGTCGGAC GCCGACCAGA TCGAGGCGGC GCTGCTGGCC ACCGGCGGCG ACAAGGCCGA CCCGCCTGAA AACCCGATGT CGGCGGACCG TGTGCGCTGG GAACACATCC AGCGCGTCTA CGAGCTTTGC GACCGCAACG TCTCGGAAAC CGCCCGCCGC CTCAACATGC ACCGCCGCAC TCTGCAGCGG ATACTGGCGA AACGCGCGCC GAAATAG
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Protein sequence | MEPSGLESGQ FRQRLDDQVT DSAEAPEGET PTIPEDRTLL LVDDDIPFLT RLARAMEGRG FEVTTASTVK DGKELARSKK PGFAVVDMRL EDGNGLDVVA TLEEVRPDAR IVVLTGYGNI ATAVTAVKLG AVDYLAKPSD ADQIEAALLA TGGDKADPPE NPMSADRVRW EHIQRVYELC DRNVSETARR LNMHRRTLQR ILAKRAPK
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