| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0018 |
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| Symbol | |
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| ID | 5456310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 21475 |
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| End bp | 22101 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875577 |
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| Product | two component Fis family transcriptional regulator |
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| Protein accession | YP_001411298 |
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| Protein GI | 154250474 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.594546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0172011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCCAT CCGGCCTAGA ATCCGGCCAA TTCCGACAGA GATTGGACGA CCAAGTGACA
GATTCTGCCG AGGCGCCCGA GGGCGAGACC CCCACCATTC CCGAAGACCG CACCTTGCTG
CTGGTCGATG ACGACATCCC CTTTCTGACG CGGCTTGCCC GGGCGATGGA AGGCCGCGGC
TTCGAGGTGA CGACCGCCAG CACAGTGAAG GACGGCAAGG AGCTTGCCCG CTCGAAAAAG
CCGGGCTTCG CGGTTGTCGA CATGCGGCTC GAAGACGGCA ACGGGCTCGA CGTGGTGGCG
ACGCTGGAAG AGGTGCGGCC CGATGCGCGC ATCGTCGTGC TGACCGGCTA CGGCAATATC
GCGACGGCGG TGACGGCGGT GAAGCTCGGC GCGGTCGACT ATCTCGCGAA GCCGTCGGAC
GCCGACCAGA TCGAGGCGGC GCTGCTGGCC ACCGGCGGCG ACAAGGCCGA CCCGCCTGAA
AACCCGATGT CGGCGGACCG TGTGCGCTGG GAACACATCC AGCGCGTCTA CGAGCTTTGC
GACCGCAACG TCTCGGAAAC CGCCCGCCGC CTCAACATGC ACCGCCGCAC TCTGCAGCGG
ATACTGGCGA AACGCGCGCC GAAATAG
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| Protein sequence | MEPSGLESGQ FRQRLDDQVT DSAEAPEGET PTIPEDRTLL LVDDDIPFLT RLARAMEGRG
FEVTTASTVK DGKELARSKK PGFAVVDMRL EDGNGLDVVA TLEEVRPDAR IVVLTGYGNI
ATAVTAVKLG AVDYLAKPSD ADQIEAALLA TGGDKADPPE NPMSADRVRW EHIQRVYELC
DRNVSETARR LNMHRRTLQR ILAKRAPK
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