| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0005 |
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| Symbol | |
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| ID | 5454418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 4682 |
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| End bp | 5920 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640875564 |
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| Product | DNA replication and repair protein RecF |
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| Protein accession | YP_001411285 |
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| Protein GI | 154250461 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0464034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 1.0596299999999999e-21 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCTCGAA CGAGTGAGTT GCTCGCGCTC GAACGGTCTG CGTCCGCGCC GGAAATATCC
GGTGCCGTCG TGACGGCCCC TCTTGCGTCT CCGCGCGCGA GGCTGAGCCG TCTTGTCGTC
ACCGATTTCC GCTCCTATGC GCGCGCCGAG CTCGCGCTGG ACGGGCGCCC GGTGGTCCTG
ACCGGCGAAA ACGGCGCCGG CAAGACCAAT CTGCTCGAAG CCGTCTCCCT GCTCTCGCCC
GGTCGCGGCC TTCGCGGCGC GGCCTATGCG GAAATCGCGC GGGACAATGG CGAGGGCGGC
TGGGCCGTCG CCGCGACGCT CGAAGCCGAG CATGGCCCCG TCCGTCTCGG CACGGGCATC
GAGCCGGGCA TGGCGCCTTC CTCGCGCAGC CGCTCGGTCC GTATCGATGG CGAGCCTGCC
GGTCCTTCCG CGCTTGCGGC GCATCTGCGG ATCGTCTGGC TGACGCCGGC CATGGACAGG
CTTTTCGTCG AGGGCGCGAG CGAACGCCGC CGCTTTCTCG ACCGGCTGGT GATGGGGTTC
GATCCGGCCC ATGGCACGCG CGCCGCGGCC TATGAACGGG CCCTGCGCGA GCGCAGCAAG
CTGCTCGCCG ACGATGTTTT CGACGATGCC TGGTTGTCGG GCCTCGAAAG CCAGATGGCT
GAGCATGGCG TGGCGCTTGC CGCCGCCCGG CTCGAAATCG TGGCGCGGCT TCGCGGTGCG
CTCGATGTGG CGCCCGAAGG GCCTTTCCCC CGTGCCCATG TGGCGCTGGA AGGTTCGCTC
GAAACGGCGC TGGCGGAAGC TGCCGCCGTC GATGTCGAGG ATGGCTTTCG CGCCCGCCTC
GCCGAAATGC GCGGCCGCGA TGCGGCTGCG GGCCGCGCGC TCGATGGTCC GCACAGGAGC
GATCTCCTGG TGCGCCACAC CGCGAAGGAT CGCGAGGCGC GCCAATGTTC GACCGGCGAG
CAGAAGGCGC TGCTGATCGG CATCGTGCTG GCGAATGCCC GGCTTCTCGC CGCCATGGGC
CGCGCGCCGC TGCTGTTGCT GGACGAGGTC GCCGCGCATC TCGATGCCGG CCGTCGCGCC
GCGCTGTTCG ACGAAATCGT GAGCCTCGGT TTGCAGGCTT TCATGACGGG CACGGACCCG
TCGCTGTTTG AAACGCTGGG CGAGCGGGCG CAAGACCTTC GTGTCGCGCA TGGCACGATA
CAGAGCGCCA CCCGGTACCC CGTGGAAGGA AAAAAGTGA
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| Protein sequence | MPRTSELLAL ERSASAPEIS GAVVTAPLAS PRARLSRLVV TDFRSYARAE LALDGRPVVL
TGENGAGKTN LLEAVSLLSP GRGLRGAAYA EIARDNGEGG WAVAATLEAE HGPVRLGTGI
EPGMAPSSRS RSVRIDGEPA GPSALAAHLR IVWLTPAMDR LFVEGASERR RFLDRLVMGF
DPAHGTRAAA YERALRERSK LLADDVFDDA WLSGLESQMA EHGVALAAAR LEIVARLRGA
LDVAPEGPFP RAHVALEGSL ETALAEAAAV DVEDGFRARL AEMRGRDAAA GRALDGPHRS
DLLVRHTAKD REARQCSTGE QKALLIGIVL ANARLLAAMG RAPLLLLDEV AAHLDAGRRA
ALFDEIVSLG LQAFMTGTDP SLFETLGERA QDLRVAHGTI QSATRYPVEG KK
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