Gene Fnod_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1777 
Symbol 
ID5452587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1929457 
End bp1930206 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content38% 
IMG OID640875546 
ProductWecB/TagA/CpsF family glycosyl transferase 
Protein accessionYP_001411267 
Protein GI154250442 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGTG GTGGAATTTT GGAACAGGTT TCTTTTTATT CTTATAACTT GCTATGTGGC 
AAAGCTGAAG AGTTACGCCG GTATCTTGTT GATTCAATAG TTTCAGGTAA CAAACTTTTT
GTTGTAACTT TAAATAGTCA AATTTTTTTG AGAGCTCAAC AAATTCCTGA TTATGATGAA
GCATTAAGAC ATGCCACATT TCATTTACCT GATGGATCTG GAGTTGTTTG GGCCGTTAAA
CGTCACTGCA ATGTGGTTAC TGATAGAGTA CCAGGAATTG ATACTATGCT TTATTTATGT
GAGGAAGCAA AGAACAGAGG TTGGAAAGTT TATCTTTTGG GAGCAAGACC GGATGTAGTA
AATAGAGCAG CTGAAAATTT GAGAAATAAA GGGGTCAACA TTGTTGGGTA CCATCATGGA
TATTTTGAAG ACCAAACGCC TGCGGAAGAA ATAGAAAAAT TAAAACCGGA TTTACTATTC
GTTGGTATGG GCGCGCCAAG ACAGGAACTT TGGATTTACC AACACATGCA ATTACCATTT
AAGTTGGCAA TGGGAGTTGG AGGTAGTTTT GACGTAATTG CCGGTGTTAA AAAGAGAGCT
CCTAAATTTT TCCAAAAGAC ACGTTTAGAG TGGTTTTACA GATGGATAAC AGAACCAATA
TCAAGGTCTC GCGTGCCTTT AGATGTGGCT AAATTCTTTT TCAAGGTGGT GCTTGATGGA
AAAGACGGAA ATTGTGAGAA AATACGTTGA
 
Protein sequence
MFGGGILEQV SFYSYNLLCG KAEELRRYLV DSIVSGNKLF VVTLNSQIFL RAQQIPDYDE 
ALRHATFHLP DGSGVVWAVK RHCNVVTDRV PGIDTMLYLC EEAKNRGWKV YLLGARPDVV
NRAAENLRNK GVNIVGYHHG YFEDQTPAEE IEKLKPDLLF VGMGAPRQEL WIYQHMQLPF
KLAMGVGGSF DVIAGVKKRA PKFFQKTRLE WFYRWITEPI SRSRVPLDVA KFFFKVVLDG
KDGNCEKIR