Gene Fnod_1769 details

Gene Information

• Locus tag: Fnod_1769
• ID: 5452787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1922504
• End bp: 1923160
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640875537
• Product: uncharacterized protein-like protein
• Protein accession: YP_001411259
• Protein GI: 154250434
• COG category: [S] Function unknown
• COG ID: [COG1655] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00195397
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGATC TTTGGGATAA AAAGTATGTT TGCCCAATCT GTGGGAGTCA GGTTGTGAGT 
AAGAAAGTTT TTACAGATAA GGTGAAGATA AAAGAATACG AACCGGATAT GAAACCAAAT 
TACGAAGGTG TTAATGCACT TTTGTATTCT GCTGTTGTAT GCAATCAGTG CCATTATGCG 
GCACTTGATA CCGAGTTTGA GAATCATGTT TCGCCGATTT ATCTTGACCA AATAAGAGAT 
ATACAAAGGA AGATTAAAAT ACCAGACAAT GTATCTTTTT CTGCTGAACG TGACCACAGA 
GCAGCTATTT TATCTTACGC TCTTGCAGCG CTGTTTTATG AAGCGAAAAA GCAACCATGT 
AGAACTGCAG AGATGTATTT ACGAATCGCA TGGCTTTATA GGGAACTAAA AGATAAAGAA 
AATGAATACA AAGCTTTAGC AAGGTCATTA TTGAGCTTTG AAGAATGTTA TTCTAAAGCA 
AATATATCTG AAGAGAAAGA ACCAATGGTT ATATTTTACC TCGGAGAGCT TTCTTACAGA 
CTTGGTAAGA TGGAAGATGC AAGAAGGTGG TTTTCTATAT TGATTAATAA ATATAGAAAT 
TCTAATTCAT ATTATGTTAA GGCAGGGAGA GATAGATGGC AAGAAATAAA AGAGTAG 

 

Protein sequence

MPDLWDKKYV CPICGSQVVS KKVFTDKVKI KEYEPDMKPN YEGVNALLYS AVVCNQCHYA 
ALDTEFENHV SPIYLDQIRD IQRKIKIPDN VSFSAERDHR AAILSYALAA LFYEAKKQPC 
RTAEMYLRIA WLYRELKDKE NEYKALARSL LSFEECYSKA NISEEKEPMV IFYLGELSYR 
LGKMEDARRW FSILINKYRN SNSYYVKAGR DRWQEIKE