Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1729 |
Symbol | |
ID | 5451681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1887297 |
End bp | 1889144 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640875499 |
Product | extracellular solute-binding protein |
Protein accession | YP_001411221 |
Protein GI | 154250396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000266848 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAGAA GGTTGCTGTT AGTGTTTGTT GTTTTGGCTG CTGTTTCAAT ATTTGCCGCT TTTGATCCGA CAATTTACGT ATCAGTTGGT GTGGGAGAAC CTGACACACT CGATATTCAC CAAGCGTATG ATACTGTAAG TGGGGAGGTT ATTTATAACG TATACGAAAG TTTGATAGCT TACAAAAAGA GTAGTTTAAC GGAATTTGAG CCAAGGCTTG CCACAGAAGT ACCATCTGTG AAAAACGGAC TTATTAAAGA TGGTGGGAAA ACTTATGTGT TTCCAATAAG AAAAGGTGTC AAATTCCACA ACGGTTCTGA CCTGACACCA GAAGATGTTG AATACTCTTT TGAAAGAGGG CTTTTGTATG ATCCAGCAGG CGGACCTATG TGGATGCTCT GGAATGCGAT ATTTGGTGTT AACTCACTGA ACGAGATGAT AGAAAAGTAC GTTGGGAAGC CAGTATCAGA AATATTTAAA GACGGAGAGC CATTACCACA GTATAAAGAT AAACTTGTTG AGATGTACAA AAACGTTATA GACCCAGCGA TAGAGGTTGA CGGAAATAAT GTTGTTTTTA AACTTGTAAG GCCATACGGT CCATTCTTAA CGATTATGGC ACATACCGTT GGTTGGTCCG CTGTTTTGGA TAAGGAGACG TCTATAAAAC TTGGTTTGTG GGATGGTAAA CCTGATACAT GGTGGAAATA TAGGAATATC GCAAAAGAGA AATCACCAAT TTATGCCACA GCTATAGGTA CAGGACCGTA TAAACTTGTC GAATGGGATA GAACTAATAG AAAAGTTTTG TTGGAAGCAA ATAAAGATTA CTGGAGAGGC GAACCAAGGA TTAAGAAAGT GGTTATAATG ACGGTTAGCG AGTGGGGAAC AAGAAAATTA ATGCTTGAAA AAGGCGATGC AGATGATATA GCGATTGTGC TCGAATACCT TGACCAAATT AGGGGAAATA AAGACATCCA GATAATTGAG AATATTCCTT CACTTTCTGT AACGGTAGTT GGATTTTCTT GGTCTGTTTC ACCAAATAGT AAGTATATTG GCAGTGGAAA GTGGGACGGG AATGGAATGC CACCTGATTT CTTCAGCGAT ATAAATGCAA GAAAGGCAAT ATCTTACGTT ATAAACTACG ATGCAGTTGT TAGAGATGTT TTAAAAGGTT ATGGAATAAG AGTTCCTGCT GCTTTGCCAA ATACCTTGCT CGGTTTTGAC CCTACACTCC CACTTTACAA ATTTAACGTT ACAGAGGCAA GAAAAGCTCT TGAAAAAGCG TGGGATGGGA AGGCTCTCAA AGTTGGTTTA AAATTCTCAA TTGCTTACAA CACAGGTAAC ATGATGAGGC AAAGAATTGC GGAAATGATA AAGACGTATC TTGAAATGAT TGGATCGGGT AAGATAAAAG TTGATGTTGT TGCACTCAAC TGGCCGAGCT ATCTTGATGC GATGAGAAAG GCAGAACTTC CAATGCCTAT ATTCAACTGG TTAGCTGACT TTCCAGACCC AGATAACTTT ATATTCACCT TCTACCATTC AGCAGGTACA TATGCACCAA GGCAAGGCGA AAACTTCAAG AAATTTGTCA GTGCACCTCG AAAAGAACTT GGTGGAAAGA GTCTTGATGA ACTTATCGAA GCCGCGAGGA ATTCTTCAGA CCCAGATGAA AGAAAGAAGC TTTACGTACA AATTCAAAAA TTTGCAATTG ACAACTATAT AAGCATTCCA GTTTATCAAC CAGTTGGAGT TAGAGTCCAG AGGGCATGGG TAAAAGGTTG GTATGAAAAT CCAATGAGGC CGGGAAATGA TTACTTTGAA TTGTATAAGC AGCAATAA
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Protein sequence | MLRRLLLVFV VLAAVSIFAA FDPTIYVSVG VGEPDTLDIH QAYDTVSGEV IYNVYESLIA YKKSSLTEFE PRLATEVPSV KNGLIKDGGK TYVFPIRKGV KFHNGSDLTP EDVEYSFERG LLYDPAGGPM WMLWNAIFGV NSLNEMIEKY VGKPVSEIFK DGEPLPQYKD KLVEMYKNVI DPAIEVDGNN VVFKLVRPYG PFLTIMAHTV GWSAVLDKET SIKLGLWDGK PDTWWKYRNI AKEKSPIYAT AIGTGPYKLV EWDRTNRKVL LEANKDYWRG EPRIKKVVIM TVSEWGTRKL MLEKGDADDI AIVLEYLDQI RGNKDIQIIE NIPSLSVTVV GFSWSVSPNS KYIGSGKWDG NGMPPDFFSD INARKAISYV INYDAVVRDV LKGYGIRVPA ALPNTLLGFD PTLPLYKFNV TEARKALEKA WDGKALKVGL KFSIAYNTGN MMRQRIAEMI KTYLEMIGSG KIKVDVVALN WPSYLDAMRK AELPMPIFNW LADFPDPDNF IFTFYHSAGT YAPRQGENFK KFVSAPRKEL GGKSLDELIE AARNSSDPDE RKKLYVQIQK FAIDNYISIP VYQPVGVRVQ RAWVKGWYEN PMRPGNDYFE LYKQQ
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