| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1728 |
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| Symbol | |
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| ID | 5451671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1885565 |
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| End bp | 1886827 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640875497 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_001411220 |
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| Protein GI | 154250395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000271591 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGTACG CACTGCTCGG TTTGGGGTTG AGTAATAAGT ATGCTGCGAA GTTTCTTTTG
AAATTAGGAG AAAAGATTTT TGTAAGCGAA TCTGGAAAGC TTTCCAGTGA AGATAAGGCA
TTTTTGGAAG AAAACAACAT ACCATACGAG GAAGGAGTAA ATTCTGAGAA AATATTAGAA
GCCGATGTTA TACTCACAAG TCCGAGCGTT CCACACAACC ATCCAATTCT TTTAAAGGCT
CAACAGATGG GCAAATATGT CGATACCGAA ATAACCTACT TCATGAAATT TCTCGATTGG
AAACCGAAAA TAATAGCTGT GACAGGCTCA GTCGGTAAGA GTACAACTGT AGCGATGATT
AACCACCTCA TTTCGAAATC AGCATCATCC CAAATTTCTG GAAACTTTGG GATCCCCATT
GCTCAGGTGC TTTTGGAAGG CAAGAAACCG GAATACATAG TAGTAGAAAT AAGCAGTTTC
CAACTCTATT GGACTCCGTT TTTTAAGCCA AACGTCGCGG TTATCACTAA TATTTATCCC
AATCATTTAG ATTGGCATCC AAGTATGGAG CATTATGTTG ATTCGAAATT CAAAATAACG
AAATTCCAAG ATAACGAAGA CCACTTTGTT TACAACCCAA AAGATATGGA AACATTCAAA
AGATTAGCCC TTGTCCAAGC GAAGAGAGTT CCATTCACCG TTGATTTTAA ATTCGAAGAG
ATACCGTTCC ATATACGAAC AAAACAAAAT ATGGAAAATA TCGCCGCTGC AAAGACTGTA
TTGAAAGTAC TTGGATTACC TTTCTCAATG AGCATGCTGG AAGATTTCAC TCCGTTACCA
CACAGAATGG AATACTGCGG TACAATAAAC GGCGCACATT ATTATAACGA CTCAAAGGCA
ACAAACGCAG CCGCTGTTGT TAAAGCACTT GAGAATTTCG ATAATAATTT GTATCTCATA
ATAGCAGGAA AAGGAAAGAA CGAAGATTAC TCAAAGTTGG CTAACGAAAT ATCAAAAAAA
TGTAAATTCG TTGCCATCGT CGGACCAATT TCCGATGCGG TGGAACCCTA TTTAAAAGAA
AGGAATGTCA ATTACAAAAG ATTTTCAAAC ATCGAAGAAG CCGTTTTTGA AATAAGCAAA
ATGGCAAAAG AAGGAGATTA CGTACTCCTT GGACCTGCGG GAGCAAGTTA TGACGCCTAT
AAAAACTTCG AGGAGAGAGG TAATCATTTC AAAGAGATAG TGAAAAAATT GATGCAAGGA
TAA
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| Protein sequence | MQYALLGLGL SNKYAAKFLL KLGEKIFVSE SGKLSSEDKA FLEENNIPYE EGVNSEKILE
ADVILTSPSV PHNHPILLKA QQMGKYVDTE ITYFMKFLDW KPKIIAVTGS VGKSTTVAMI
NHLISKSASS QISGNFGIPI AQVLLEGKKP EYIVVEISSF QLYWTPFFKP NVAVITNIYP
NHLDWHPSME HYVDSKFKIT KFQDNEDHFV YNPKDMETFK RLALVQAKRV PFTVDFKFEE
IPFHIRTKQN MENIAAAKTV LKVLGLPFSM SMLEDFTPLP HRMEYCGTIN GAHYYNDSKA
TNAAAVVKAL ENFDNNLYLI IAGKGKNEDY SKLANEISKK CKFVAIVGPI SDAVEPYLKE
RNVNYKRFSN IEEAVFEISK MAKEGDYVLL GPAGASYDAY KNFEERGNHF KEIVKKLMQG
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