Gene Fnod_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1719 
SymbolqueA 
ID5453041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1872090 
End bp1873139 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content35% 
IMG OID640875488 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001411211 
Protein GI154250386 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000029618 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATA TAAACAATAA TTCTCAACTT TACAACCTTG AAATGTATGA TTATTACCTA 
CCAGAAGAGT TAATTGCACA ATCGCCCGTT GAACCAAGGG ATAGTTCAAG ATTGATGGTT
CTAAACAAAG CAACTGGTGA AATACAACAT AGGATATTTA GAGATATAGG AGAATATATT
CACGAGGGGG ATTTATTGGT TTTCAACACA ACTAAAGTCA TTCCTGCAAG ATTGTTCGGT
AAAAAGACAA CTGGTGCTAA TATCGAAATT CTTCTACTTG AGAAGTTAGG ATTAGGCATT
TGGAAATGCC TTGTCAAACC TGGTAAAGCT GTAAAAGAAG GAACGGAAAT AATTTTTGAA
AATACGAATA TGAAAATGTA TGGTAAATGT CTTTCAAGAG CAGAAGAAGG TACAAGAGTT
ATCGAATTTT CAGAAAAGGA AGATGAAAAG ATATTCTCTT TTGGAAACGT TCCATTGCCA
CATTATATAA AAAATCATAA CGTTAAAATA GAAAGGTACC AAACTGTTTA CGCAAAGCAT
GAAGGAAGCG TGGCGGCACC AACAGCTGGA TTACATTTTA CAACAGAGCT ACTTAACGAA
CTAAAAAACA AAGGCGTTAA AACAGCGGAA GTTGTCTTAC ACGTTGGAAT TGGGACTTTT
AAGCCTGTTA AAGTTGGAGA CATAAGACAA CATAAAATGC ATGAGGAGTA TTACATTGTT
TCTGGAGAAA CCATAAGTGC TATTAATGAA GTTAAAGCCT CTGGTAAAAG AGTTATAGCT
GTTGGAACAA CTACTGTAAG AACACTTGAA ACGATAGCTA GACTTCAAAA GAGTGATTCT
TACTCTGGAA AAACCGATAT ATTCATATAC CCTCCATTTG AATTTAAAAT TGTGGACGCG
TTAATAACTA ATTTTCACTT GCCGAAATCT TCATTAATAA TGCTTGTTAG TGCATTCGCT
GGTTATGATT TAACGATGAG AGCGTATAGG ATAGCTGTGC AGGAAAGGTA TAGATTTTTC
TCATTTGGTG ATGCGATGTT TATTTTTTAA
 
Protein sequence
MDNINNNSQL YNLEMYDYYL PEELIAQSPV EPRDSSRLMV LNKATGEIQH RIFRDIGEYI 
HEGDLLVFNT TKVIPARLFG KKTTGANIEI LLLEKLGLGI WKCLVKPGKA VKEGTEIIFE
NTNMKMYGKC LSRAEEGTRV IEFSEKEDEK IFSFGNVPLP HYIKNHNVKI ERYQTVYAKH
EGSVAAPTAG LHFTTELLNE LKNKGVKTAE VVLHVGIGTF KPVKVGDIRQ HKMHEEYYIV
SGETISAINE VKASGKRVIA VGTTTVRTLE TIARLQKSDS YSGKTDIFIY PPFEFKIVDA
LITNFHLPKS SLIMLVSAFA GYDLTMRAYR IAVQERYRFF SFGDAMFIF