Gene Fnod_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1708 
Symbol 
ID5452976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1859789 
End bp1860358 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content31% 
IMG OID640875477 
Productintegral membrane protein-like protein 
Protein accessionYP_001411200 
Protein GI154250375 
COG category[S] Function unknown 
COG ID[COG5652] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA ACCGTAAGTC AGGTAAAAGT CAAGAAAGGT TATCTGTGAT AATTATTTTT 
GGAGTAATAT TTTTGCTTTG GATATTTTTG ATTTTTTATT TTTCTTCCAA ATCACCGACA
GAGTCTTCGA TGCAATCGCA TTTTGTTTAC AAACTTTTAA AAAAAGTCGA TAACGTAATT
GATTTCTCAA ATACAACGCT ATTTCAAAAA ATGGAAAGAA AACTAAAGAT GATTTGGTTT
AAAACTGAAT ATGTACCTGC TGAAATGCTC ATAAGGAAGA CTGCGCATTT TGGCTTGTAT
TTTATATTTG GTAGTATCAC GACGATATTC TTTTATATTT GGAAATCAGA CATTATAGTC
TCATCGATTA TTGGAGTTTC TCTACCAGCA CTTTTCGCGG TACTCGATGA ATACAACCAG
TTGTTTTATA ACCGAGGGTC TTCGCTAAAC GATGTTGTCA TAGACATATC AGGCTCAATC
TTTGGAATGA TTCTTGTAAT TGTTTCAATA GGAACCTATA AAGTCTTTAA TATTTTTCTT
CTTAAAAAAC CTCATAAACA GTTTAAATAA
 
Protein sequence
MEKNRKSGKS QERLSVIIIF GVIFLLWIFL IFYFSSKSPT ESSMQSHFVY KLLKKVDNVI 
DFSNTTLFQK MERKLKMIWF KTEYVPAEML IRKTAHFGLY FIFGSITTIF FYIWKSDIIV
SSIIGVSLPA LFAVLDEYNQ LFYNRGSSLN DVVIDISGSI FGMILVIVSI GTYKVFNIFL
LKKPHKQFK