Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1708 |
Symbol | |
ID | 5452976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1859789 |
End bp | 1860358 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640875477 |
Product | integral membrane protein-like protein |
Protein accession | YP_001411200 |
Protein GI | 154250375 |
COG category | [S] Function unknown |
COG ID | [COG5652] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA ACCGTAAGTC AGGTAAAAGT CAAGAAAGGT TATCTGTGAT AATTATTTTT GGAGTAATAT TTTTGCTTTG GATATTTTTG ATTTTTTATT TTTCTTCCAA ATCACCGACA GAGTCTTCGA TGCAATCGCA TTTTGTTTAC AAACTTTTAA AAAAAGTCGA TAACGTAATT GATTTCTCAA ATACAACGCT ATTTCAAAAA ATGGAAAGAA AACTAAAGAT GATTTGGTTT AAAACTGAAT ATGTACCTGC TGAAATGCTC ATAAGGAAGA CTGCGCATTT TGGCTTGTAT TTTATATTTG GTAGTATCAC GACGATATTC TTTTATATTT GGAAATCAGA CATTATAGTC TCATCGATTA TTGGAGTTTC TCTACCAGCA CTTTTCGCGG TACTCGATGA ATACAACCAG TTGTTTTATA ACCGAGGGTC TTCGCTAAAC GATGTTGTCA TAGACATATC AGGCTCAATC TTTGGAATGA TTCTTGTAAT TGTTTCAATA GGAACCTATA AAGTCTTTAA TATTTTTCTT CTTAAAAAAC CTCATAAACA GTTTAAATAA
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Protein sequence | MEKNRKSGKS QERLSVIIIF GVIFLLWIFL IFYFSSKSPT ESSMQSHFVY KLLKKVDNVI DFSNTTLFQK MERKLKMIWF KTEYVPAEML IRKTAHFGLY FIFGSITTIF FYIWKSDIIV SSIIGVSLPA LFAVLDEYNQ LFYNRGSSLN DVVIDISGSI FGMILVIVSI GTYKVFNIFL LKKPHKQFK
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