| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1683 |
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| Symbol | |
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| ID | 5451957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1832523 |
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| End bp | 1835033 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640875452 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001411175 |
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| Protein GI | 154250350 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.332102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTTA AAAGTTCACA TTTGCGATTT TTAGTGATTA TTCTTTTAAC TTTAGTAATT
CTTTCATTTG CGGATGTAGC AACATACATG AAAGGTGGGT GGGCAGACAA GGTTCTCTAT
ATGATTATGA TAGACCGATT TAACGACGGT GACCCATCGA ACAATAACCA AGCAAACGTT
GAATATAACC CAAAAGATGG CGCAAAGTAC AGTGGTGGTG ATTTGAAAGG TATAATCGAT
AAAATCGATT ACATTAAAGG TTTAGGTGTC GATGGTATTT GGATTACACC TCCTATCGCT
AACCAATGGT GGGATCCATG GGTAAATTAC GGTGGTTACC ATGGTTACTG GGCAAGGGAC
TTTAAGAAAG TTGATGAACA CTTTGGCACA CTAGATGATT ATAAAAAACT AGCTGAAGTA
CTCCATAAGA GCAATATGTA CCTCATTCAA GATATCGTAG TAAATCACGT CGGAAATTAT
TTTAGATTTA AAAACGGAAA TTTCGAATTA AATACTGGGA GTATACCAAC TTCAGCTCCA
ACACAATATC CTTTTAATCT AAACAATTAC AACGACCCAG AACAACAGAA ACGTGCAATT
TATCATTGGA CACCTGATAT AAATAACTAC AGTGACCCTG TTCAAAAATT GAACTATCAA
ATGAGTGGCC TTGATGACTT AAATACGGAA AATCCGGAAG TTATACAAGC TCTTAAAGAT
TCTTACAAAT ACTGGGTTCA AGAAGTTGGT GTCGATGGAT TCAGAGTTGA TACAGCCATG
TACGTACCAA AATCCTTCTT TGACGAATTT TTCAACGCTC CAGATGGAAT ATTCAGCTTA
AAAAAGAATT TTATAGCTTT TGGGGAAACC TGGCTCTCTT CTAAACCATA TGAGTCGGAA
TCTGATAAAG AAATCGCTTC ATTCTTTGAC CACGGATTTA ACTCTATGCT TGATTTTACA
CTTATGGAAG AATTAAGAAG GGTTATAAAA GGAGGACAAC CCACGGATTT CCTTGCATAC
AGACTCGAAC TAAGAAACGA GATATTGAAA AAAGGATTGC TTGTTACATT TATAGATAAC
CATGATATGG AAAGGTTTGG AAAGGGTGTT ACCCCGAATA TCACTCAACA AGCTTTGGGG
TTAATATTAA CATTACCAGG ATTACCCGTG ATATATTACG GAACAGAACA GTACTTTGAG
GAAACACGCG CGTCGATGTT CAAAAATGGC TGGGGTTCTT TCGGAGAAGA TCATTTCAAT
CAAAATAGCG ATATGTATAA ATTTATACAA GAAGCAATCA AATTCAGAAA AAATCATCCG
GCAACACGTT ATGGCGAGGT AAAGGTTCTT CTATCTGAAA AACGCTCATC TGGATTGTTA
GTTTACACAT TAAAATGTTC TGAAGAAGAA TTATTCGTTG TACTTAACAC ATCTAACGAG
CCAAGGATAA CTAATTTTAA ATCACCATAT GAATCAGGCA CCACACTTGA ACCAATTTAC
AACATAGTGG GTGGAACAAG CACTCCTATA GTTGTTAAAG AAGGTGGATA CATAACTCTA
AGAATACCCG GAAGAAGTTT GACTTTATTC TCAATATCAC CTGAAAAAAG CGATGTGTAC
ACACCTAACG TTAAAGTCGA ACTTGAAATG AAATCTGGCG AATCAATCTC GCAACTTAGA
GAAATAAAAG GTGAAACAAA CGCAAGAACT GTCTACTTAT ACATTGATAG AAAAGTTGAG
AGCGAGCAGA AAATTGAGCC AAAAGACGGA AAGTTCTCAT TCACAATTGA CCCTATGAAA
TTCGACCCTG GCGAGCACAT ATTACTTGTC AGAGCGGTTG GAAAAACATT AAAAGATACT
GTGTACACGG AAGAAATAAA AATAAATATA ACCTTAGAAA AGAAAGTCCT TGCGGAAGTA
AAAGACCCTA TGGACGATGA TTCAGGTCTA AATTATTCTT ACGTTTACCC AACAGATGCA
ACATTTAAAA GGCAAATGGA CATACTTGAG ACAAAAGCTG AGAGTATAGG CAGTACTTTG
GTTATCTCAA TAAAACCAAG AGATCTCACA AAGAGCTGGG GACCTCCTTA CGGTTTTGAC
CATGTAACTT ATCAGATATT CATAGACGAC CCAAATAAGA AAGGCGTAAG TTATCTCCCG
TTGCAGAATT ACGAATTTTC TGATTGGGAT TGGGATTACG AAATCTTCGC AACAGGTTGG
CTTAGTGCCA TTTATACTGC AAAAGGCTCT TCGAAAGATA AATTTGGAAC ACAAATCGGT
TCACCAGAAG TGTTCGTTGA AGATGGCTGG GTAAAGATAA TTGTAAAAGG CGATTGGATC
GGTAATCCAT CTGATTTCAC CAATTGGACA ATATACATAA CAAGTTGGGA CTACGATGGA
ATTGAAAGTA AATTCAGACC ATTACAACAA GAACCAAAGG CGTACATTAT GGGTGGTGGA
AATCCAAACG ATCCACTGAT TATGGACGAT TGCTGGTTAG AAATTAAATA A
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| Protein sequence | MRLKSSHLRF LVIILLTLVI LSFADVATYM KGGWADKVLY MIMIDRFNDG DPSNNNQANV
EYNPKDGAKY SGGDLKGIID KIDYIKGLGV DGIWITPPIA NQWWDPWVNY GGYHGYWARD
FKKVDEHFGT LDDYKKLAEV LHKSNMYLIQ DIVVNHVGNY FRFKNGNFEL NTGSIPTSAP
TQYPFNLNNY NDPEQQKRAI YHWTPDINNY SDPVQKLNYQ MSGLDDLNTE NPEVIQALKD
SYKYWVQEVG VDGFRVDTAM YVPKSFFDEF FNAPDGIFSL KKNFIAFGET WLSSKPYESE
SDKEIASFFD HGFNSMLDFT LMEELRRVIK GGQPTDFLAY RLELRNEILK KGLLVTFIDN
HDMERFGKGV TPNITQQALG LILTLPGLPV IYYGTEQYFE ETRASMFKNG WGSFGEDHFN
QNSDMYKFIQ EAIKFRKNHP ATRYGEVKVL LSEKRSSGLL VYTLKCSEEE LFVVLNTSNE
PRITNFKSPY ESGTTLEPIY NIVGGTSTPI VVKEGGYITL RIPGRSLTLF SISPEKSDVY
TPNVKVELEM KSGESISQLR EIKGETNART VYLYIDRKVE SEQKIEPKDG KFSFTIDPMK
FDPGEHILLV RAVGKTLKDT VYTEEIKINI TLEKKVLAEV KDPMDDDSGL NYSYVYPTDA
TFKRQMDILE TKAESIGSTL VISIKPRDLT KSWGPPYGFD HVTYQIFIDD PNKKGVSYLP
LQNYEFSDWD WDYEIFATGW LSAIYTAKGS SKDKFGTQIG SPEVFVEDGW VKIIVKGDWI
GNPSDFTNWT IYITSWDYDG IESKFRPLQQ EPKAYIMGGG NPNDPLIMDD CWLEIK
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