| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1669 |
|---|
| Symbol | |
|---|
| ID | 5453284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1818747 |
|---|
| End bp | 1819838 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640875438 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001411161 |
|---|
| Protein GI | 154250336 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.178321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA ACAATTACTT TCTTATATTA AGAACGATAT TTCACAACAA AACGATAGAT
CGTGTTAGTC TTACGAAAAT AACAGGGCTA TCTCCGAGTA CTGTTACAAG GTGCGTTACT
CAACTTCTCG AAAGAGGCGT GATAACTGAA ACAAGTCGTT TAGAAGAAAA AACTGGTGTT
GGAAGGAAAT CAATAGGATT AGCAATAAAT CCAGATGCAC TAAAAGTTTT ATTAGTTGAT
ATTGGCGCTC AAAATACAAA TTATGCTCTT GGAATGGCGA ATGGAGAATT TGTAAAACTT
GAATCGGGGA AGACACCAAA TAGTTTTGAT GAGATAATTG ATAACGTTAA TTCATTAACA
AAAAGTTATA ACGATGTTGA GGTAGTTGCG TTTTCCATAC CCGGTATGGT TGATACAGAT
AACGATACTA TTCTATTTGT ACCAAGCAAA GGGTGGAAAA ACATAAAAAT AGAGATTCCA
GAAAAGGTAA TTTACGCAGA TAACGAAGCA AATCTTGCGA TGATAGCGGA AGCGTTTCAA
AGAGAAGAAG TGAGAAAATC AAAAAGTTCT GTCTTTGTAA CAATTAGAGA GGGACTTGGT
ACAGGTTTGT GGATAAATGG AAATATATTC CGTGGTCCGT CTTTTACAGC TGGTGAATTT
GGTCACACGA TATTTGATTT AAGTAGTAAT ATCAAGTGCC GTTGTGGGAA CAACGGTTGC
ATGGAAGGTT ACGTTTCTAT CACCTCATAC TTTGGTAAGT TGCAAAAAGA TTGGGGAAAA
TACCTGAGCG ATTTGTACTT AAGAAAGGAT AAAAGAATGC AAGAATACAT CGAACTATTA
GCTAAAGCAC TTATGAATAT AGTGAATTCT ATAAATCCAG AGTACCTTAT AGTTGGTGGT
GAATTGTCGG GACTGCCTTT GGATTTTTAC AAAGATTTGG AATACAAATT GAAGTCGAAA
GTGCTTGAAC ATTCAGCAAG TATATTAAAA GTTCTGCCAG CAACCTTTAC ACATGATACT
TACTTATATG GTGCGCTTTA TGCAGTTATT GAAGAATATT TCATACCAAA TGTTATAACA
ATTATAAGTT AA
|
|---|
| Protein sequence | MKENNYFLIL RTIFHNKTID RVSLTKITGL SPSTVTRCVT QLLERGVITE TSRLEEKTGV
GRKSIGLAIN PDALKVLLVD IGAQNTNYAL GMANGEFVKL ESGKTPNSFD EIIDNVNSLT
KSYNDVEVVA FSIPGMVDTD NDTILFVPSK GWKNIKIEIP EKVIYADNEA NLAMIAEAFQ
REEVRKSKSS VFVTIREGLG TGLWINGNIF RGPSFTAGEF GHTIFDLSSN IKCRCGNNGC
MEGYVSITSY FGKLQKDWGK YLSDLYLRKD KRMQEYIELL AKALMNIVNS INPEYLIVGG
ELSGLPLDFY KDLEYKLKSK VLEHSASILK VLPATFTHDT YLYGALYAVI EEYFIPNVIT
IIS
|
|---|
| |