Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1658 |
Symbol | |
ID | 5453250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1804123 |
End bp | 1804920 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640875427 |
Product | peptidase M23B |
Protein accession | YP_001411150 |
Protein GI | 154250325 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.508498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAAAAA TATTAGCTTT AGCGCTGATA TCAATAGTAG CAACAATCTT TCCTTTCTAT ATAAACTATC AAGTTCAGAA GGGGGATACT CTTTATAGTA TTTCAAAGGG GTTTGGTATA CCAATTCCTA TACTTCTTGA TTGGAATACA GGGTTAGCGC CATCAAATTT AAGAGCCGGG AGTTCAATTA AAGTACCTGT TGTCCCAGGT ATAATGTTCA AAAGCACTAA GAGTATTAGT TTATCAGAAC TTGCTAAGTA TTTTTTCATT GATCCTGAAG AGATAGTCAC AGTTAATCCA TCTATTGGTT CAACAATACC AGCAAATAAA GAAGTTTTTG TACCATTGGG AAAAACAAAT ACATCTTTTG CTCAAATATC TGATTTCATA TGGTCCGTTT ATGGAAGAAT AACTTCAGAG TTTGGTTGGA GAATACATCC AATATACGGC AAGAACCTTT TCCATACAGG AGTAGATATT TCCGTGCCAA CAGGTACACC GGTCTTTGCT TCGAAGTCTG GTGTCGTAAA ATATGCAGGT TGGATGAGCG GCTATGGCAA TTTAATAATA ATCGATCATG GAAGTTTTGA AACGTATTAT GCGCACCTTT CCAAGATAAA CGTTTACGTT GGATTGCAAG TTGAGAAGGG TGATTTCATA GCAAGGTCCG GAAGTACTGG TACGTCAACA GGTCCACATC TACACTTTGA AGTTAGAAAA TATGGAGAAG CAAATGACCC CGTTGCGTAT CTCCCAAGAA CAACAACGTA CGTTATGAGG AGGGTTATAT CTGAATAA
|
Protein sequence | MRKILALALI SIVATIFPFY INYQVQKGDT LYSISKGFGI PIPILLDWNT GLAPSNLRAG SSIKVPVVPG IMFKSTKSIS LSELAKYFFI DPEEIVTVNP SIGSTIPANK EVFVPLGKTN TSFAQISDFI WSVYGRITSE FGWRIHPIYG KNLFHTGVDI SVPTGTPVFA SKSGVVKYAG WMSGYGNLII IDHGSFETYY AHLSKINVYV GLQVEKGDFI ARSGSTGTST GPHLHFEVRK YGEANDPVAY LPRTTTYVMR RVISE
|
| |