Gene Fnod_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1654 
Symbol 
ID5453106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp1801068 
End bp1801529 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content30% 
IMG OID640875423 
Producthypothetical protein 
Protein accessionYP_001411146 
Protein GI154250321 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATAG AATTAATTGT TCCTGGCAAA TTATCCAAAC ACTTGCAACC AGCATTTGAT 
TACTATGTTG AAAAATTAAA TCGCTTTGCA AAAATTAGTG TTCATTTTGT TGAGCTTGGT 
GGAGATTTAA ATACGGAAGA TGAAAAAACT ATTCTAAAAA AAGAGGCAGA ACACATTAAA 
AAAAGATTGA AAGATAGAAA ATTCATATTG CTCGATTTAT GGGGGAAAGA ATTAACAAGT 
ATTGAGTACG CAAGATTTCT GGAAAATACC ATAAATAAAT TGTCAGAAAT TGTTTTTGTG 
ATAGGTGGAC CTTTAGGTAT CGACGATTCA CTTAGAGAAA ATGCATTGGC AAAAATATCA 
CTCTCAAAAA TGACATTCAC GCACGAAATG TGCGTGATTC TATTTTTGGA ACAAACTTTT 
AGAGCTTTTA AAATACTGAA AAATGAAAAA TATCATTATT AA
 
Protein sequence
MKIELIVPGK LSKHLQPAFD YYVEKLNRFA KISVHFVELG GDLNTEDEKT ILKKEAEHIK 
KRLKDRKFIL LDLWGKELTS IEYARFLENT INKLSEIVFV IGGPLGIDDS LRENALAKIS 
LSKMTFTHEM CVILFLEQTF RAFKILKNEK YHY