| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1642 |
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| Symbol | |
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| ID | 5452918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1788607 |
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| End bp | 1790808 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640875411 |
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| Product | cobalamin B12-binding domain-containing protein |
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| Protein accession | YP_001411134 |
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| Protein GI | 154250309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAC TCGACCCAAG AAAACAAATC GACGTTGAAG AAATATTAAA AGACTTAGAT
AAATATAGAC CTAAGAGAAG AGGTTGGACT TGGAGAAAGA AATTGCCAGA AGGGACAAAA
ATAGACAGAT ACGATTATCA CCAAATAAGT GAGCTTTTGA AAAACAGTAT ACCACTACCT
GCTGCTCACT ATTTCAACAA CATAGATCCT CAACCAGATG TTGTTATAAC TTCCGAAATC
GCTTCAGGAA GGTTTGAAGA CGATATTAGG CGTATGAGAA TGGCGGCATG GCATGGTGCT
GACCATATTA TGGTTATCCG CACACTTGGT CAATCACACT TCGATGGTCT TATAGAAGGG
ACACCAGAAG GTGTAGGTGG AATCCCTATA ACAAGAAAAC AAGTTAGAGC AACAAGAAAA
GCCCTTGATT TAATCGAAGA AGAAGTTGGA AGACCGATAA ATTTCCACAG CTACGTTTCG
GGCGTCGCAG GTCCAGAAAT TGCAGTTTTA TTCGCTGAAG AAGGAGTTAA CGGCGCACAC
CAAGACCCAC AGTACAATGT CTTATACAGG GGTGTCAATC CAGTCAGGTC ATTTGTAGAT
GCTGCAGTTG CAAAAAAGAT AATGGCATGG GCAAATATGC TCCAAATAGA TGGTGCACAT
AACGCCAATG CATCAGCAAA ATTGGCATGG ACCGTTATGC CAGAATTACT GGTCCAGCAT
GGTATCAATT GTATGTATTC TGTCAAAGTT GGTATGCCAA AAGAAAACAT CGCACTTTCA
ACAGTCCCAC CAGTAATTGC TCCACTTCCA GAAATGCGTA TCGATTTACC ATACGCTGTC
GCACTTAGAG AACTTTTCCA AGGCTACAGA TTTAGAGCGC AGATGAATAC ACGATACATT
GAATCTGACT TATTCGACGC AACAAGAGCG CATGTTCTCA ACGCAGTACT TTCAAGACTA
ACAAGCGCGG ATTTACAATC AACAATTACA CCAGACGAAG GAAGAAACGT TCCATGGCAT
ATAAATTCCA TACGTGGTGT GGAAACTGCA AAGCATACAT TGCTTGCAAT GGACGGAATT
AAAAAATACG TAAAGATAGA CCAAGAAGCG ATAAGGGAAA AAGTTAGAGA ACTAAAAATG
CGAGCTATAC TAATGCTCGA AGAGATAATC GAAATGGGAG GCTATTTCGA AGCTCTTGAA
GCTGGAATGT TCGTTGACAA TGGATATTAT CCAGAAAGAT TCGGCGATGG AATAGCGAGA
AAAAAAGATG GAGAATTAGC CGCCGGTACG GTTGTACCAA GAGACCACGA TTACATGGCA
CCAGTTTGTG AACACTTTGG TTACAATAAC TTACCTGAAG GGTTGGAAAA ACCATGCGAC
TTAATTAACG GATGTACGTT CCATAATCCT GATAAAATAC AGTTCATTGA TGAGCTTGAT
GAAACAGATA ACGTTAATTT AAGACTTGAA AAAATTAAAG ATATGAAAAA ACGAAACGTG
ATAAAACCTG AAGTTGAATG GTTTGCCGAT GGTTGGATAC AGCTAGATAT GACTTTCTCA
TTGCCCGAAG AATACGCAGA AGCCGCGGCA CTTGCCGTAT GTGAAAAACT TGGTCTTGAG
GAACCAACAA TTATAGCTAA GACAGTACTT CACCCATCTG AAGGTACATA CGTTGAAGTA
AAAGCAAAAG TGCCATTTGA AATTAAAATC GATGAACTTG AACTTCCTAA GAAACCAGAA
ACTTTACCTG AAGAAGAACT TTTCAGCTTC GTCGAAAAAC GCCCAATTAA AGTTGTAGCT
GCCACTGTTG GTGAAGACGA GCATTCAGTT GGCTTAAGGG AAGTACTTGA CATAAAACAC
GGTGGTATAG AAAAGTATGG TATAAAATAT GTTTACCTCG GTACAAGCGT GCCACCAGAA
AAATTAATTG ATGCTGCCAT AGAAACCGGA GCAGACGCTA TTTTGGCATC GATGATAATT
ACACATAACG ATGTGCACAT CAAAAATATG AGAAGATTAA ACGAACTGGC GATAGAAAAA
GGAATAAGGG ATAAAGTACT CATCATAGTC GGAGGAACAC AGATAAATAA CGACATGGCA
ATAGAAAATG GAGTAGACGC AGGTTTTGGC AGAGGGACGA AAGGTATCCA TGTAGCATCG
TTTATTGTCA AAAAACTAAA AGAAAGAGAA TCTCAAAAAT AA
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| Protein sequence | MDKLDPRKQI DVEEILKDLD KYRPKRRGWT WRKKLPEGTK IDRYDYHQIS ELLKNSIPLP
AAHYFNNIDP QPDVVITSEI ASGRFEDDIR RMRMAAWHGA DHIMVIRTLG QSHFDGLIEG
TPEGVGGIPI TRKQVRATRK ALDLIEEEVG RPINFHSYVS GVAGPEIAVL FAEEGVNGAH
QDPQYNVLYR GVNPVRSFVD AAVAKKIMAW ANMLQIDGAH NANASAKLAW TVMPELLVQH
GINCMYSVKV GMPKENIALS TVPPVIAPLP EMRIDLPYAV ALRELFQGYR FRAQMNTRYI
ESDLFDATRA HVLNAVLSRL TSADLQSTIT PDEGRNVPWH INSIRGVETA KHTLLAMDGI
KKYVKIDQEA IREKVRELKM RAILMLEEII EMGGYFEALE AGMFVDNGYY PERFGDGIAR
KKDGELAAGT VVPRDHDYMA PVCEHFGYNN LPEGLEKPCD LINGCTFHNP DKIQFIDELD
ETDNVNLRLE KIKDMKKRNV IKPEVEWFAD GWIQLDMTFS LPEEYAEAAA LAVCEKLGLE
EPTIIAKTVL HPSEGTYVEV KAKVPFEIKI DELELPKKPE TLPEEELFSF VEKRPIKVVA
ATVGEDEHSV GLREVLDIKH GGIEKYGIKY VYLGTSVPPE KLIDAAIETG ADAILASMII
THNDVHIKNM RRLNELAIEK GIRDKVLIIV GGTQINNDMA IENGVDAGFG RGTKGIHVAS
FIVKKLKERE SQK
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