| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1612 |
|---|
| Symbol | |
|---|
| ID | 5451561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1759051 |
|---|
| End bp | 1760622 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640875386 |
|---|
| Product | resolvase domain-containing protein |
|---|
| Protein accession | YP_001411109 |
|---|
| Protein GI | 154250284 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTA GTAAAAATGT AATGATTATA CCTGCAATAA AACGCATGGG CAACAATCGA
AAAGAAGATG AAACACCAAA ACTTCGGGTT GCTGCTTATT GTCGAGTTTC TACCGACAGC
GATGAACAAG CTAGTAGTTA CGAAGTGCAG ATTGAACATT ATACTGAATT TATTAAGAAA
AATTCAGAGT GGGAATTTGC AGGGATCTTT GCTGATGATG GTATCAGCGG TACAAATACA
AAAAATCGTG ATGAATTTAA TCGAATGATT GATGAGTGTA TGGCTGGGAA AATTGATATG
GTTATTACCA AATCAATAAG CCGATTTGCT AGAAATACCT TGGACTGTCT ACAATACATC
AGAAAACTTA AAGATAAAAA TGTTGCGGTA TATTTTGAGA AAGAAAATAT CAATACACTG
GATGCCAAAG GTGAAATTAT GCTTACCATT ATGGCATCCT TAGCGCAACA AGAGAGCCAG
TCACTAAGCC AGAATGTAAA GCTTGGTTAC CAATACCGAT ACCAACAGGG AGAGGTAATG
GTCAATTGTT CTAGGTTTTT AGGATATACC AAAGATGAAA ATAAGCGATT AGTAATTGTG
CCGGAGGAAG CTGAAATTGT TAAAAGGATT TACCGAGAGT ATCTTGAAGG CTCCAGTATG
GATAAAATCA AAAAAGGACT TGAAACTGAT GGCATACTTA CGGGAGCGGG GAAAAAAAGG
TGGCATACCA GTACTATAAG GAAAATATTA AGCAATGAAA AATACATTGG TGATGCATTG
CTCCAAAAAA CTTATACGGT AGATTTTCTT ACAAAAAAGA GGGTTGTGAA TAACGGAATC
GTACCTCAGT ATTATGTAGA GAATAACCAT GAAGCCATTA TCCCGCGTGA AATTTTCATG
CAGGTACAAG AAGAGTTAGT TCGTAGAAGT AGAGGACATA TAAGTACTAG TGGAAAGAAA
AGAAACTTTA GTTCAAATCA TGTATTTTCG CAAATTATCT TCTGTGGTGA GTGTGGCGAA
ATATACCGTA GAGTTCATTG GAATAATCGA GGTAAAAAAT CGATTGTTTG GAGATGCGTC
AGTAGACTTG AGAATACAGG GTTAACTTGT CATTCCCGAA CCGTGCTGGA GGATATGATA
GGTATTGCTA CGGTAGAGGC AATTAATAAA CTAATAGGGC AAAAGGATGG CTTTTTAACT
ATCTTAAAGG AAAATATAGA AACAGTGATA AGTGAAACGG GCAATAATGT TGTTTCCGAG
ATAGATAAAA AGCTAGAGGA ATTACAAAAA GACCTTTTGA GACTGGCCAA TTCCAAAGAG
GATTATAACG ATATAGCCGA TGAGATTTAC AGGCTCAGAG AGGAAAGACA TAAGGCTTTA
GCAGAAGAAG CTGGCAAAAA AGGCTCCAAG CAAAGACTAG AAGATATGGA AAAGTTCCTA
AATGAACAAT CCACCCTCCT TGAGGAGTAT GATGAGCAAC TAGTAAGGAG ACTTATAGAG
AAAATAACGG TTTATGATGA CAAACTAACT ATTGAATTTA AATCTGGTGT AGAAATTGAT
ATAGAAAAAT AA
|
|---|
| Protein sequence | MAVSKNVMII PAIKRMGNNR KEDETPKLRV AAYCRVSTDS DEQASSYEVQ IEHYTEFIKK
NSEWEFAGIF ADDGISGTNT KNRDEFNRMI DECMAGKIDM VITKSISRFA RNTLDCLQYI
RKLKDKNVAV YFEKENINTL DAKGEIMLTI MASLAQQESQ SLSQNVKLGY QYRYQQGEVM
VNCSRFLGYT KDENKRLVIV PEEAEIVKRI YREYLEGSSM DKIKKGLETD GILTGAGKKR
WHTSTIRKIL SNEKYIGDAL LQKTYTVDFL TKKRVVNNGI VPQYYVENNH EAIIPREIFM
QVQEELVRRS RGHISTSGKK RNFSSNHVFS QIIFCGECGE IYRRVHWNNR GKKSIVWRCV
SRLENTGLTC HSRTVLEDMI GIATVEAINK LIGQKDGFLT ILKENIETVI SETGNNVVSE
IDKKLEELQK DLLRLANSKE DYNDIADEIY RLREERHKAL AEEAGKKGSK QRLEDMEKFL
NEQSTLLEEY DEQLVRRLIE KITVYDDKLT IEFKSGVEID IEK
|
|---|
| |