| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1607 |
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| Symbol | |
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| ID | 5451580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1754530 |
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| End bp | 1755933 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640875383 |
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| Product | glutamate synthase (NADPH), homotetrameric |
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| Protein accession | YP_001411106 |
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| Protein GI | 154250281 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTGA AAGACAGAGT CCACGTGCCA GAACAACCTG CTGAAATAAG AAAAACTAAC
TTTTTGGAAG TATCGCTCGG TTACACACCA GAATTGGCGC AACAGGAAGC CTCACGATGC
TTACAATGTA AAATACCAAC GTGTATATCC GGTTGTCCGG TCGGTATCGA TATACCGGGC
TTTATTAAAG AGATAGCTAA GGGTAATTTC GAAGGTTCGT ATAAGATTTT AAAATCTTAC
AATTATCTGC CAGCAATATG TGGACGTGTA TGTCCACAAG AGGTACAATG CGAGGGGTTA
TGCATTTTAA ATAAAATTGG AAGATCAATC AACATAGGTG CACTTGAACG ATTCGTCGCA
GATTGGGCGG ATGAAAACAA CATCGAATAC GAAAATGAAA ATACTAAATT TCAATTCAAC
ATAAGCAAAG CAAAAGATAA GAAAGTGGCT ATAATCGGCT CTGGACCAGC CGGATTGACG
GTTGCATCTG AACTTGGTAG ATATGGTTTC ACCGTGGATA TATACGAAGC CCTGCACGAA
TTCGGCGGTG TATTGACGTA CGGTATACCA GAATTCAGAT TACCAAAATC GATAGTCAAA
AAAGAAATTG CCGCACTTGA AAAACTCGAT GTGCGATTTT TCAAGAATAT ACCAGTTGGA
TACGCTATAT CCGTTAAGGA AATCCTCGAA TCTTACGATG CCGTTTTCAT CGGTGTCGGT
GCTGGCACAC CTAAATTTAT GGGCATACCC GGAAGTGAGT TGAACGGTGT GTATTCTGCC
AACGAATTTT TAACAAGGAT AAACCTTATG AGAGCGTACA AATTCCCGGA GTACGATACA
CCTATACGAA TCGGCAAAAA AGTGGCTGTA ATCGGTGGTG GAAACACCGC AATGGATGCA
GCAAGAAGTG CTCTAAGACT TGGTGCAGAC GTCACTATAA TATACCGTCG AACAGAAGCA
GAAATGCCAG CGAGAAAAGC GGAAATCGAA CATGCGAAAG AAGAGGGTGT TAAATTTTAC
ACACTCGCAA CACCTGTCAA GTACATCGGT GATGAAAATG GTAATTTGGT AGCTATCGAA
TGTATCAGGA TGGAACTTGG CGCGCCTGAT GAAAGTGGTA GAAGACGACC TGTTGAGATT
CCAAACAGTA ACTTTATCTT GGAAATGGAT ACAGTTATCG AAGCGATAGG TACTGAAGCG
AATAAATTTC TGCTCAGTCA ATTTCCAGAT TTAAAGACAA ACAAATACGG TTACATAATA
ACAGACGAAT ACGGTCAGAC AAGTAATCCG AAAGTCTTCG CTGGAGGAGA TATTGTAACA
GGTTCAGCAA CAGTTATCTT AGCCATGGGA GCTGGTAAAA AAGCTGCGCA AGGTATAATG
AAATTCCTAT CAGAAAACAG ATGA
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| Protein sequence | MAVKDRVHVP EQPAEIRKTN FLEVSLGYTP ELAQQEASRC LQCKIPTCIS GCPVGIDIPG
FIKEIAKGNF EGSYKILKSY NYLPAICGRV CPQEVQCEGL CILNKIGRSI NIGALERFVA
DWADENNIEY ENENTKFQFN ISKAKDKKVA IIGSGPAGLT VASELGRYGF TVDIYEALHE
FGGVLTYGIP EFRLPKSIVK KEIAALEKLD VRFFKNIPVG YAISVKEILE SYDAVFIGVG
AGTPKFMGIP GSELNGVYSA NEFLTRINLM RAYKFPEYDT PIRIGKKVAV IGGGNTAMDA
ARSALRLGAD VTIIYRRTEA EMPARKAEIE HAKEEGVKFY TLATPVKYIG DENGNLVAIE
CIRMELGAPD ESGRRRPVEI PNSNFILEMD TVIEAIGTEA NKFLLSQFPD LKTNKYGYII
TDEYGQTSNP KVFAGGDIVT GSATVILAMG AGKKAAQGIM KFLSENR
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