Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1601 |
Symbol | |
ID | 5451641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1749183 |
End bp | 1750196 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640875377 |
Product | alanine racemase |
Protein accession | YP_001411100 |
Protein GI | 154250275 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.520299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAAATA TCCGTGAAGT GGCTAAACTT GCCAACGTTT CGATAGCCAC CGTCTCACGA GTACTCAACG GAAGTGATAA GGTATCTCCT GAAACAAGAA AAAAGGTACT CAGTGCTATG AAAAAGTTAG ATTACAAACC TTCGTTCTCT TTTAAAGATA GTACAACTAA ATTGATGCAT ACAATTGGTG TGCTCATGCC TGATATCCGT GGTTACCATT ACAGCGATAT AGTTATGGCT ATAGAAGAGT ACGCTTATTC TAAGAATTTC GACATCATGC TTGCTCTTCC AAAATGGGAA ATCGATATAG AAAAGCATGT ACTTGACCAA TATTTCCGCA GGAAAGTCGA CGGTATTATA CTGGGTGAAT TATTCGCAGG TCAAAAGATG AGAGAAAGAT TCAAAAAAAG TGGTGTACCT ATCGTCGTTA TAGACTTTCG AGTTGATGAG ATCGATTTCG ATGTGGTCAA CGTGGATAAC GTAACCGGTG GTTATCTGGC TATGAAATAT CTTTACGACC ACGGACACAG AGATATATTG TTTATCCCTG GTCCTGAGTT ATCTCCAGCA GCGCAAGACA GGGAAAAAGG TATTCGCAAG TTCCTCGATA AAATATCAAA GAAAGATGAA GTAAAGGTGT ACCTTGGTGA ACACCGTGGG TACAACTCCG AGCATGGATG GGTTAGTGTA ACACAACATC TAAACAAATA CGGATTGAAC TTCACCGCAA TATTTGCCGT AAACGATTGG GCGGCTCTTG GCGCAATAGA TGCACTGAAA GATTACGGTA TAAAGGTACC TGACGAAGTA TCGATAATAG GTTTCGACGA TGCACCGTTT GCACAATACA CAAACCCGAG ATTAACAACT GTGATGCAAC CACGCTGGGA GATGGGCACA ACCGCAGCAC AACTTTTGAT AGAACGTATC CTTGACAAAC ATCTCAGATT ACCAAGAAAC GTTATATTAC CCACAAAAAT AATCGAACGA GAATCTGTGA AAAAGATAAT GTGA
|
Protein sequence | MANIREVAKL ANVSIATVSR VLNGSDKVSP ETRKKVLSAM KKLDYKPSFS FKDSTTKLMH TIGVLMPDIR GYHYSDIVMA IEEYAYSKNF DIMLALPKWE IDIEKHVLDQ YFRRKVDGII LGELFAGQKM RERFKKSGVP IVVIDFRVDE IDFDVVNVDN VTGGYLAMKY LYDHGHRDIL FIPGPELSPA AQDREKGIRK FLDKISKKDE VKVYLGEHRG YNSEHGWVSV TQHLNKYGLN FTAIFAVNDW AALGAIDALK DYGIKVPDEV SIIGFDDAPF AQYTNPRLTT VMQPRWEMGT TAAQLLIERI LDKHLRLPRN VILPTKIIER ESVKKIM
|
| |