Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1592 |
Symbol | |
ID | 5452860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1736300 |
End bp | 1737370 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640875369 |
Product | ABC transporter related |
Protein accession | YP_001411092 |
Protein GI | 154250267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.911818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCAAG TATCTTTAAA AATAGAAAGT GTCTCAAAGA TATTCAAAGA CTACAAGGGT AGGGAAATAA AAGCTGTTGA TAATATAAGT TTTGAAGTCA AACCAGGTGA GTTTGTAACA TTACTTGGGC CATCTGGCTG CGGCAAAACA ACAACATTGA GAATGATTGC TGGATTTGAA AAACCTACAA GTGGGCGCAT TTTGATAAAT GATACGAATG TTGTTGAAAT TCCACCATGG AAACGAGACA CCGCGATGGT CTTTCAAAGC TACGGATTAT TTCCACATAT GAATGTAAAA GAAAACATAG CATACGGACT CAAGATGAGA AAAATTCCAA AAGAAGAAAT AAATAAAAGG GTTGAAAACA TTTTAAAAAT AGTTGGTTTA GAAGGGTTTG GCGATAGACC ACCATCAAGC CTTTCTGGTG GGCAACAACA AAGAGTTGCG CTTGCAAGAG CCCTTGTAGT TGAACCATCT GTATTGCTCT TTGATGAACC TTTATCAAAT TTAGATGTTC TGTTGAGAGA ACAGATGAGA GTTGAAATAA AGAGAATACA AAGAGAAGTA GGCATCACTG CGATATATGT TACTCATGAT AGAACGGAAG CTTTGACATT ATCCGATAAA ATCGTGTTAA TGAATAAAGG AAAAATAGAG CAAATCGGCA CACCAGAGGA TATATACGAA AGACCTGCAA GTAAGTTTGC AGCTGAATTC ATAGGAAAAA TCAACTTCTT CCCAATTGAA GTTCTTGAAA TTGGAAAAGA AGAAACAACG ATAAGATTAA AAGGGAAAAC ATACAAAATT TCTGCTCTCC CAACAGCCAA ATCTGAAAAA TATATATTAG GTTGTAGGCC AGAAGGGTTA AAGATATCAA AAGAAGGACC AATAAGTGGA AAAATCAAAA CTGTGGTTTA TCTTGGTAAT TTCATCGAAT ACTATATAGA CACAGAGTTT GGTGAAGTTA TGATTAAAAT TGTTCCACCA TTTGAAAGTG AATTAGTCGA AGGTAGTGAA GTAAAAATCG ATATAGTACC AGATATAGCC AAGATAATAC CTGAAGATTA A
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Protein sequence | MKQVSLKIES VSKIFKDYKG REIKAVDNIS FEVKPGEFVT LLGPSGCGKT TTLRMIAGFE KPTSGRILIN DTNVVEIPPW KRDTAMVFQS YGLFPHMNVK ENIAYGLKMR KIPKEEINKR VENILKIVGL EGFGDRPPSS LSGGQQQRVA LARALVVEPS VLLFDEPLSN LDVLLREQMR VEIKRIQREV GITAIYVTHD RTEALTLSDK IVLMNKGKIE QIGTPEDIYE RPASKFAAEF IGKINFFPIE VLEIGKEETT IRLKGKTYKI SALPTAKSEK YILGCRPEGL KISKEGPISG KIKTVVYLGN FIEYYIDTEF GEVMIKIVPP FESELVEGSE VKIDIVPDIA KIIPED
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