Gene Fnod_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1592 
Symbol 
ID5452860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1736300 
End bp1737370 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content35% 
IMG OID640875369 
ProductABC transporter related 
Protein accessionYP_001411092 
Protein GI154250267 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.911818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAAG TATCTTTAAA AATAGAAAGT GTCTCAAAGA TATTCAAAGA CTACAAGGGT 
AGGGAAATAA AAGCTGTTGA TAATATAAGT TTTGAAGTCA AACCAGGTGA GTTTGTAACA
TTACTTGGGC CATCTGGCTG CGGCAAAACA ACAACATTGA GAATGATTGC TGGATTTGAA
AAACCTACAA GTGGGCGCAT TTTGATAAAT GATACGAATG TTGTTGAAAT TCCACCATGG
AAACGAGACA CCGCGATGGT CTTTCAAAGC TACGGATTAT TTCCACATAT GAATGTAAAA
GAAAACATAG CATACGGACT CAAGATGAGA AAAATTCCAA AAGAAGAAAT AAATAAAAGG
GTTGAAAACA TTTTAAAAAT AGTTGGTTTA GAAGGGTTTG GCGATAGACC ACCATCAAGC
CTTTCTGGTG GGCAACAACA AAGAGTTGCG CTTGCAAGAG CCCTTGTAGT TGAACCATCT
GTATTGCTCT TTGATGAACC TTTATCAAAT TTAGATGTTC TGTTGAGAGA ACAGATGAGA
GTTGAAATAA AGAGAATACA AAGAGAAGTA GGCATCACTG CGATATATGT TACTCATGAT
AGAACGGAAG CTTTGACATT ATCCGATAAA ATCGTGTTAA TGAATAAAGG AAAAATAGAG
CAAATCGGCA CACCAGAGGA TATATACGAA AGACCTGCAA GTAAGTTTGC AGCTGAATTC
ATAGGAAAAA TCAACTTCTT CCCAATTGAA GTTCTTGAAA TTGGAAAAGA AGAAACAACG
ATAAGATTAA AAGGGAAAAC ATACAAAATT TCTGCTCTCC CAACAGCCAA ATCTGAAAAA
TATATATTAG GTTGTAGGCC AGAAGGGTTA AAGATATCAA AAGAAGGACC AATAAGTGGA
AAAATCAAAA CTGTGGTTTA TCTTGGTAAT TTCATCGAAT ACTATATAGA CACAGAGTTT
GGTGAAGTTA TGATTAAAAT TGTTCCACCA TTTGAAAGTG AATTAGTCGA AGGTAGTGAA
GTAAAAATCG ATATAGTACC AGATATAGCC AAGATAATAC CTGAAGATTA A
 
Protein sequence
MKQVSLKIES VSKIFKDYKG REIKAVDNIS FEVKPGEFVT LLGPSGCGKT TTLRMIAGFE 
KPTSGRILIN DTNVVEIPPW KRDTAMVFQS YGLFPHMNVK ENIAYGLKMR KIPKEEINKR
VENILKIVGL EGFGDRPPSS LSGGQQQRVA LARALVVEPS VLLFDEPLSN LDVLLREQMR
VEIKRIQREV GITAIYVTHD RTEALTLSDK IVLMNKGKIE QIGTPEDIYE RPASKFAAEF
IGKINFFPIE VLEIGKEETT IRLKGKTYKI SALPTAKSEK YILGCRPEGL KISKEGPISG
KIKTVVYLGN FIEYYIDTEF GEVMIKIVPP FESELVEGSE VKIDIVPDIA KIIPED