| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1588 |
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| Symbol | |
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| ID | 5451664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1733161 |
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| End bp | 1734111 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640875365 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_001411088 |
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| Protein GI | 154250263 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000341303 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTTAG GTGTTTTACT TGGTGGAATT TCAAGAGAAA GGGAGATTTC TATTAGGAGT
GGAAAAAGGA TAGCGCAGGC TTTAAGAAAT ATGGGACATG TAGTTGACGA AATCGATGTC
GATGATAATT TTATCTACAA GCTCTCCGAA TTGAAAAAAT ACGATGCATT ATTTAATATT
CTCCATGGAA CTTTTGGTGA AGATGGTAAA ATGCAAGCGA TATTGGACTC CATAGGCATA
CCTTACACTG GTTCTGGAGT AGAAACGAGT GTTATTGCTT TTGATAAATA TTTATGCAAC
CTTTTTGTTG AAAATACTAT AGAAAGATAT GAGGAACTAA GCGTTGTAAA GATACCTAAT
TTTCTTTTAA TCAGCTCAGA GGAATTTGAA GAATCGAAAA TATATATGAT TGAAGAAAAA
ATAGGGTTAC CATGTGTTGT GAAGCCAAGG AAAGAAGGAT CAAGTATAGG AACACACATT
TGTTTTTCAA AAGAAGAACT TTTAGATGCC CTTAAGAACG AATTCAAAAA TTATGACGAA
ATGATTGTTC AGGAATACAT TAAAGGAAAG GAAATAACAG TTTCTGTGAT AGATATTAAT
GGTACTCCAA CCGTTCTTCC GATACTTGAA TTGAGGCCCA AAAAATTATT TTACGATTAT
GAAGCTAAAT ACACGGATGG AATGACAGAA TTTATTATAC CGGCTGAACT TGATGGAGAA
ACAACGGAAA AAATAAACCA CGCAGTATTG AAGATATATA AATCACTTGG TTGTAAACAC
TTTTCGAGAA TAGATGGAAT AGTTAAGGAT GGTGTTTTTT ATTTTCTTGA AGTTAATACT
CTGCCTGGTA TGACTGAGCT AAGCGATTTG CCAATGTCAG CAAATGCTTT TGGTATTTCT
TTCGATGAAC TTGTTGATTT GATAATCAAA GAAGCATGCA GGAAGCTTTA G
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| Protein sequence | MYLGVLLGGI SREREISIRS GKRIAQALRN MGHVVDEIDV DDNFIYKLSE LKKYDALFNI
LHGTFGEDGK MQAILDSIGI PYTGSGVETS VIAFDKYLCN LFVENTIERY EELSVVKIPN
FLLISSEEFE ESKIYMIEEK IGLPCVVKPR KEGSSIGTHI CFSKEELLDA LKNEFKNYDE
MIVQEYIKGK EITVSVIDIN GTPTVLPILE LRPKKLFYDY EAKYTDGMTE FIIPAELDGE
TTEKINHAVL KIYKSLGCKH FSRIDGIVKD GVFYFLEVNT LPGMTELSDL PMSANAFGIS
FDELVDLIIK EACRKL
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