| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1579 |
|---|
| Symbol | |
|---|
| ID | 5451693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1720854 |
|---|
| End bp | 1723181 |
|---|
| Gene Length | 2328 bp |
|---|
| Protein Length | 775 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640875354 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_001411079 |
|---|
| Protein GI | 154250254 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTACA TAGTAGCATT ATCAAATTCA AGTCAAATCG AACCTGTCTT TTGTGAGTAC
AATGGGCACA TTGAAATAGG TGAAAGAGTT TTACTTCAGC ATAAAGGTAA AAAGGTTTTA
GGTTATGTAA TTGGTAATCA AGAATGGGCC CCTTGCGATG AATTTTTACC TAACCAGAAA
TCAAGTTCAG AATATTCAAA AATCGTTGAG CGAATGGATT ATATATCCTT CCTTGAAAAA
TCAAGGGTAA AAGCTTTATA CGGTTTAGCG AATTTTTACT TTTCTGGATT AGGTAAGTAT
TTTGATATAT CTTTTCCAAA TAAATTTGAT GATTATTTTT CACTTTTTGT TGAAAGTGTA
AGTCCTTTTG TAAATATCGA GAAAATGCCA TACGAAGAAT TCAAAAAAAT CAAAAATTAT
AAAGAGTATA TCAATAACGG TTTGGTCAAA GTTTACAGAG ATTTTGAAAC GAAAAAGCCA
AGACCAAGAA AAAGAGGAGA ATGTGTTTAC TTAAAAATTT CTTCAATTGA ATTGTCAAAA
TTAAAACTAA CGGTATCGCA GAGTACGGTT GTTAATTATT TACTTTTCAA AGGCCCTACC
GAAGTTGAGC AAATAATAGA AGATTTAGAT GTAAAAAAAG ATGTTGTTGT ACAATTAAAA
AATAAAGGAA TAATTGAGAT TTTAGAGCAA TGTAGTGATT TTGAAACACT TAATATAAAA
CCACAGAGAG TTATTTTAAG TGACGAACAA AAGAGTATAG TTGACAAAAT ACTTTCATAC
GATTTTAGAA AAGAAAAGAA ACACCTTGTT TTTGGACCAA CTGGAAGTGG CAAGACAGAG
GTTTATCTCG AGGTCATTGA AAAATACTTA CCATTTGGCA ATGTACTATA TTTAGTTCCA
GAGGTATCTT TAACTGAACA AACGATAGCA AGGCTTAGAA AAAGATTTCC AGATTTATCT
ATAGCGGTTT ACCATAGCTA TTTAACAGAA TCAAAGCGCG TTGAAATTTG GGCGAAAGCG
GTTAAAGGTG AGATAAATAT ATTAGTTGGT CCAAGAAGTG CTGCGTTTGT GCCTTTAAAA
AACCTTAATC TTGCAATTGT TGATGAAGAA CATGATGAAG GCTATTACAA TAATTCTGAG
CCTTTTTACG AAATTCACAC ATTTCTTAAT GCTTTACCAA TTACTGTTGT GTATGGTTCA
GCTACCCCTT CTTTGGAAAG TTATAAGAAA GCCAAAGATG GGGAATATGT ATTTCACAAG
CTTACTAAAC GTTACAACGT TGAATTACCA GAAGTTGAAA TTGTGGACAT GAATAAAACA
AAGAAAGTTA CTTTCTCTAT ATCTGAAATC TTGTACAATA ATCTAAGTAA AGTGCTTGAA
GCTGATAAAT CAGCCATAAT ATTCACGAGG CGAAAAGGTT TTTCAAGGGT GCAATGTGCT
GTATGCGGTT ATATAGTAAA ATGCGAACAT TGTGATGTTG CAATGACTTA TCATTTGGAT
TCGAATAATT TGAAATGTCA CATCTGTGGA AGTGAGAAAG AATTATCCTT AAATTGTCCT
AACTGTGGTT CAAATATGTT CATAGATAGA GGAACTGGTA GTGAGAAAGT TGAAAAAGAA
CTCCAGCAAC TCTTTCCATC GAGAAATATT GGAAGGATTG ATGCAGAAAT AGCTGATACC
CCAGAAAAAC TGAAAAAACT CTTAGACTAT TTAAGAGAAG GGAAAATCGA TATAGTTGCT
GGGACAAAGA TGATTACGAA GGGGTTAGAT ATATACAGAA TAGCGCTCAT TGGTGTTGTG
GATGTTGATG CTTTAATTTC TTATCCTGAT ATAAACGCTC CACTGAGAAC ATTTCAACTT
TTAGTTCAGG TAATTGGTAG AGCAGGGCGA AATGAAAAGG GAAAGGCGAT AATTCAAACT
TATAAGCCAA CCGATCCAGT AATAACATTT GCGAGTAATC AAGATGTTGA AGGGTTCTAT
GAGAGAGAAC TTGAGATAAG AAAACAACTG AATTATCCAC CTTTTGCGTC TGTAGTTGTA
TTAACTTACG CCAATCTGAA TCAGGAAATA GCGCGAGAAA CAATTGACAC TGTTGCAGAT
GAAATAGAAA ACATTGAAAA AAAAGAGAAA AAGGTCCAAG AAGTTTATAA ATATTACTTA
GAACTTCTTG GACCTTCTGA ACATCCTATA TTTAAAGCAA ATAATAAGTA CCGATATCAA
ATATTTTTCA AGACAAACAA CGTACCAGAA TTAGTAAGGC TTTTGAAAAA GATAATCTCA
AATTACTCTG GGGAATGGAT TATAAAGGTG AATCCAAACG AAATATGA
|
|---|
| Protein sequence | MIYIVALSNS SQIEPVFCEY NGHIEIGERV LLQHKGKKVL GYVIGNQEWA PCDEFLPNQK
SSSEYSKIVE RMDYISFLEK SRVKALYGLA NFYFSGLGKY FDISFPNKFD DYFSLFVESV
SPFVNIEKMP YEEFKKIKNY KEYINNGLVK VYRDFETKKP RPRKRGECVY LKISSIELSK
LKLTVSQSTV VNYLLFKGPT EVEQIIEDLD VKKDVVVQLK NKGIIEILEQ CSDFETLNIK
PQRVILSDEQ KSIVDKILSY DFRKEKKHLV FGPTGSGKTE VYLEVIEKYL PFGNVLYLVP
EVSLTEQTIA RLRKRFPDLS IAVYHSYLTE SKRVEIWAKA VKGEINILVG PRSAAFVPLK
NLNLAIVDEE HDEGYYNNSE PFYEIHTFLN ALPITVVYGS ATPSLESYKK AKDGEYVFHK
LTKRYNVELP EVEIVDMNKT KKVTFSISEI LYNNLSKVLE ADKSAIIFTR RKGFSRVQCA
VCGYIVKCEH CDVAMTYHLD SNNLKCHICG SEKELSLNCP NCGSNMFIDR GTGSEKVEKE
LQQLFPSRNI GRIDAEIADT PEKLKKLLDY LREGKIDIVA GTKMITKGLD IYRIALIGVV
DVDALISYPD INAPLRTFQL LVQVIGRAGR NEKGKAIIQT YKPTDPVITF ASNQDVEGFY
ERELEIRKQL NYPPFASVVV LTYANLNQEI ARETIDTVAD EIENIEKKEK KVQEVYKYYL
ELLGPSEHPI FKANNKYRYQ IFFKTNNVPE LVRLLKKIIS NYSGEWIIKV NPNEI
|
|---|
| |