Gene Fnod_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1575 
Symbol 
ID5451626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1716446 
End bp1717855 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content31% 
IMG OID640875350 
Productmembrane protein-like protein 
Protein accessionYP_001411075 
Protein GI154250250 
COG category[S] Function unknown 
COG ID[COG4267] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGGA TAGGATTTGA ATTAAACAAA CTGTTAAAAC GAAATTCTTT TTTCTCGGAA 
GCTGTCGCAT TCTTTTATTC TGCAAATATA TCTGCAGGAC CATGGATAAT ATCTTCGTTG
ACACTTTTTC TAATACAAGT TTATATACCT CAACAGAATA TTCCATTCCT AGTCTCAGGA
ATTATTTATA CTTTCATTTT TTCAACAATA CTTTTTGGAA GCGTTGCAAC TTCCGTTACA
CGTTATTTAT CTGATTTGAT TTATAAGAAG GAATTTAATA ATATATATAA ACTTTACACT
TCGTTGGTTG GTTATGCGTT TATATCTTCT GGGATATTTC TTACCTTGTT CTTCCTTATC
AACAAAATTT CTGAGTGGCA AAAAATTATT CTTTTTTCAT ATTCTTTGAT TGTTCTTTCG
ATAATTTGGG TTCAAGTCAT TTTTATATCC GCTATTAGAA AATTTTCTCC CGTTATTCTA
AGTTTTTTAT TCGGTGGTAC TGCTGGTTTC TTTTTAACTT TGTACCTTTA TAAAACCAAA
AATGAATATT ATGCTTACGC AGGTTACAAT TTTGGTTTAA TGATTATACT TACAATTCTT
CAACTTTACA TTCGAAGATA TCTTTATTTA GGAGAAGAGG TGGAAAAAGA ACAAAAAAAT
ATTAATCCTC CGCTTTTTAT ACTCTCGATT AAGGCATACA AAAAACAGGC ACTATCAGGT
TTTTTTACTT ATATGGCTGC TTGGGTTGAT GATTTTATCG CTTGGATTTA TTTCAGATAC
AGTATTTCAA AAGGTTTTGT ATTTGCGCCC CAGTATGATA TTCCAATGTT TATCTCATAC
CTTTTTATAA TTCCAACCTT GTCACTTTTC GTTCTAAACT TGGAAACGGA ATTTTATTTT
TACTATAGAG CTTTTTACAA ATCTATCGAA GAAAATCGCA CTTTGAACTT TATAAGGATA
AGTAAAAATA ATTTAGACGA AAGTCTTTAT TCTTCAACTA AACTTGTATT AGCGGTTCAA
TTTTCATTTA TGTTAACTGG TCTTATTCTT TCTGATAGTT TAGCTGATTT GTTGAGGCTT
GATAGCTACG GCTCAACGGC TTTAAAATTT GGTATTGTTG GTGCTGCTGC AAATGGAATT
TATCTTTACA TTTCTTTGAT AGCGCATTAC TTTGACTTGC CTGGTATACC ACTTAAATCT
TCTATAATGG CCTTTTTGAT TAATTTATTT TTATCACCAC TCACTGTCAA GCGTTTGCCT
GGAATCGGTT TTGTCATTGG TTTTATTTTT GCCACGATAT ACAGTTTTAT TAGATTTAAT
CGCATTTATT CTAATTTGCT CATGTTTGAG TTTTCAAGAA ACAGGCTGAA ACTTCCGAAG
GTAGGGGTTA TAATTCATGA AAACAAATAA
 
Protein sequence
MAGIGFELNK LLKRNSFFSE AVAFFYSANI SAGPWIISSL TLFLIQVYIP QQNIPFLVSG 
IIYTFIFSTI LFGSVATSVT RYLSDLIYKK EFNNIYKLYT SLVGYAFISS GIFLTLFFLI
NKISEWQKII LFSYSLIVLS IIWVQVIFIS AIRKFSPVIL SFLFGGTAGF FLTLYLYKTK
NEYYAYAGYN FGLMIILTIL QLYIRRYLYL GEEVEKEQKN INPPLFILSI KAYKKQALSG
FFTYMAAWVD DFIAWIYFRY SISKGFVFAP QYDIPMFISY LFIIPTLSLF VLNLETEFYF
YYRAFYKSIE ENRTLNFIRI SKNNLDESLY SSTKLVLAVQ FSFMLTGLIL SDSLADLLRL
DSYGSTALKF GIVGAAANGI YLYISLIAHY FDLPGIPLKS SIMAFLINLF LSPLTVKRLP
GIGFVIGFIF ATIYSFIRFN RIYSNLLMFE FSRNRLKLPK VGVIIHENK