Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1566 |
Symbol | |
ID | 5451727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1706809 |
End bp | 1707807 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640875341 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001411066 |
Protein GI | 154250241 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000751653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAATCGA TACTCAGCGT TAGAAACCTT AGTACCTGGT TTTATTTAGA AGAAGGGGTA TTAAAAGCTG TTAACGATGT TTCCTTTGAA CTTTCCGAAA ATGAGGTTCT TGGGATAGTT GGCGAAACCG GATCAGGAAA GAGTATAACA GTTAGAAGTA TTATGAGACT TATCCATCAT CCTGGTAAAA TTGTCCAAGG TCAAGTTATA TATAGAGGCC GTGGTAAAGA AGAAGACATA GTTAAAATGA GCGAAGATGA ATTGACACAA ATAAGAGGTA AAGAAATTTC AATGATATTC CAAGACCCGT TGACATCACT TAACCCGTTA TATACAATAG GTGACCAGCT TATAGAAACG ATTATGCAAC ATCAAGATGT CGATAGACCA ACTGCTTGGA AGCTTGCTGT CGAGATGCTT GAAAAAGTTC AAATACCCGA ACCTGAAAAA CGAATGAATT CATACCCATT TGAGTTCAGC GGTGGAATGA AACAACGTGT GGTAATTGCT ATAGCACTTT CATGTAATCC AAAAATACTT ATAGCTGATG AGCCAACAAC GGCTTTGGAC GTTACAATAC AAGCACAAGT CCTTGAACTT ATGAAAGATT TACAAAAAGA ATTAAAAACA GGAACGCTAT TCATAACTCA CGACCTTGGG GTTATATCTG CTATGGCTGA CAGGGTTATG GTCATGTACG GTGGAAGACA GATGGAACTT GGTCCAGCTG AAGATATCTT CCACAAACCG ATGCATCCTT ACACAAATAT GCTTCTTAAA TCAATACCAC GTGTTGATAT AAAACAAGAT AAAATTGAAG CGATACCCGG ACAACCGCCA AGAATGATAG ATGTTCCCGA CGTATGTCCA TTTGCACCAA GGTGCCCAAG AAGATTAGAT AAATGTACTA AAGAACTACC AAAATTTGAA GAATTAGAAC CAGGACATTT TGTAAGATGC TTTAACCCAG TAGAAGCCGG AGGGGATGTA AATGCCTGA
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Protein sequence | MESILSVRNL STWFYLEEGV LKAVNDVSFE LSENEVLGIV GETGSGKSIT VRSIMRLIHH PGKIVQGQVI YRGRGKEEDI VKMSEDELTQ IRGKEISMIF QDPLTSLNPL YTIGDQLIET IMQHQDVDRP TAWKLAVEML EKVQIPEPEK RMNSYPFEFS GGMKQRVVIA IALSCNPKIL IADEPTTALD VTIQAQVLEL MKDLQKELKT GTLFITHDLG VISAMADRVM VMYGGRQMEL GPAEDIFHKP MHPYTNMLLK SIPRVDIKQD KIEAIPGQPP RMIDVPDVCP FAPRCPRRLD KCTKELPKFE ELEPGHFVRC FNPVEAGGDV NA
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