Gene Fnod_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1566 
Symbol 
ID5451727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1706809 
End bp1707807 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content39% 
IMG OID640875341 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001411066 
Protein GI154250241 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000751653 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATCGA TACTCAGCGT TAGAAACCTT AGTACCTGGT TTTATTTAGA AGAAGGGGTA 
TTAAAAGCTG TTAACGATGT TTCCTTTGAA CTTTCCGAAA ATGAGGTTCT TGGGATAGTT
GGCGAAACCG GATCAGGAAA GAGTATAACA GTTAGAAGTA TTATGAGACT TATCCATCAT
CCTGGTAAAA TTGTCCAAGG TCAAGTTATA TATAGAGGCC GTGGTAAAGA AGAAGACATA
GTTAAAATGA GCGAAGATGA ATTGACACAA ATAAGAGGTA AAGAAATTTC AATGATATTC
CAAGACCCGT TGACATCACT TAACCCGTTA TATACAATAG GTGACCAGCT TATAGAAACG
ATTATGCAAC ATCAAGATGT CGATAGACCA ACTGCTTGGA AGCTTGCTGT CGAGATGCTT
GAAAAAGTTC AAATACCCGA ACCTGAAAAA CGAATGAATT CATACCCATT TGAGTTCAGC
GGTGGAATGA AACAACGTGT GGTAATTGCT ATAGCACTTT CATGTAATCC AAAAATACTT
ATAGCTGATG AGCCAACAAC GGCTTTGGAC GTTACAATAC AAGCACAAGT CCTTGAACTT
ATGAAAGATT TACAAAAAGA ATTAAAAACA GGAACGCTAT TCATAACTCA CGACCTTGGG
GTTATATCTG CTATGGCTGA CAGGGTTATG GTCATGTACG GTGGAAGACA GATGGAACTT
GGTCCAGCTG AAGATATCTT CCACAAACCG ATGCATCCTT ACACAAATAT GCTTCTTAAA
TCAATACCAC GTGTTGATAT AAAACAAGAT AAAATTGAAG CGATACCCGG ACAACCGCCA
AGAATGATAG ATGTTCCCGA CGTATGTCCA TTTGCACCAA GGTGCCCAAG AAGATTAGAT
AAATGTACTA AAGAACTACC AAAATTTGAA GAATTAGAAC CAGGACATTT TGTAAGATGC
TTTAACCCAG TAGAAGCCGG AGGGGATGTA AATGCCTGA
 
Protein sequence
MESILSVRNL STWFYLEEGV LKAVNDVSFE LSENEVLGIV GETGSGKSIT VRSIMRLIHH 
PGKIVQGQVI YRGRGKEEDI VKMSEDELTQ IRGKEISMIF QDPLTSLNPL YTIGDQLIET
IMQHQDVDRP TAWKLAVEML EKVQIPEPEK RMNSYPFEFS GGMKQRVVIA IALSCNPKIL
IADEPTTALD VTIQAQVLEL MKDLQKELKT GTLFITHDLG VISAMADRVM VMYGGRQMEL
GPAEDIFHKP MHPYTNMLLK SIPRVDIKQD KIEAIPGQPP RMIDVPDVCP FAPRCPRRLD
KCTKELPKFE ELEPGHFVRC FNPVEAGGDV NA