Gene Fnod_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1565 
Symbol 
ID5451734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp1705809 
End bp1706816 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content36% 
IMG OID640875340 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001411065 
Protein GI154250240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000744963 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATA AAAAAAATAA CGAAGTAATA ATTAAAGTAG AAAACCTAAA AAAATACTTT 
CCCATATACA AAGGATTTCT AATGAAGAAA CATGTTGCTG ATGTTAAAGC AGTTGACGAT 
GTTTCATTTG AAGTAAAGCG TGGGGAAACA TTCGCATTGG TTGGAGAATC TGGTTGTGGA 
AAGACAACAA CTGCAAGAGT AATGCTAAGA TTGATTGATC CAACAGATGG AAAAATAGAA 
GTCCTTGGTA CGGATATTTC AAAAATGTCA AGAGAAGAGC TTCTACCATT TAGAAGAAAA 
ATGCAAATAG TTTTCCAAAA CCCTATTGGT TCTCTTAATC CAAGAATGAC AGTTGGACAA 
ATTCTTACGG AACCGATGCT CTTCCACAAA ATTGTTCAAA ATCAACAAGA AGCAAACGAA 
AAAGCGGTTG AACTTTTGAA GATGGTTGGT TTAAAAGCAT TTCATATGGA TAGATATCCA 
CACCAATTTA GTGGTGGGCA AAAACAAAGA ATTGCTATCG CACGTGCTCT TAGCGTTGAC 
CCAGAGATAA TATACCTTGA TGAACCAACT TCTGCACTTG ATGTGTCTGT TCAAGCACAA 
ATAGTAAATT TGCTCTTGAA GTTCCAACAA GAGCTTGGAT TAACATATGT ATTTATCTCA 
CATAACCTTG CACTCGTTAG ATTTATTAGT AACAACGTTG CTGTTATGTA CCTTGGAAAA 
ATTGTGGAAA TGGGAGATGT AAATGAAGTA TTTGACAATC CTATTCATCC ATATACAAAA 
GCGTTATTAT CAGCATCACC AATTCCAGAC CCTGCAATAG AAAAGAAGAG AAAACGTATA 
ATATTAACAG GTAATGTACC AAGCCCAATA GCAAGACCAA GTGGCTGTTT CTTCCATCCA 
AGGTGCCCAT TTAAAATGGA TATATGTGAA AAAGAATATC CACAAATGAA ATCAGTTTCT 
TCAAATCACC AGGTTTCGTG CTACCTGGTA GATAAAAGGG AGGTGTAG
 
Protein sequence
MPDKKNNEVI IKVENLKKYF PIYKGFLMKK HVADVKAVDD VSFEVKRGET FALVGESGCG 
KTTTARVMLR LIDPTDGKIE VLGTDISKMS REELLPFRRK MQIVFQNPIG SLNPRMTVGQ 
ILTEPMLFHK IVQNQQEANE KAVELLKMVG LKAFHMDRYP HQFSGGQKQR IAIARALSVD 
PEIIYLDEPT SALDVSVQAQ IVNLLLKFQQ ELGLTYVFIS HNLALVRFIS NNVAVMYLGK 
IVEMGDVNEV FDNPIHPYTK ALLSASPIPD PAIEKKRKRI ILTGNVPSPI ARPSGCFFHP 
RCPFKMDICE KEYPQMKSVS SNHQVSCYLV DKREV