| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1564 |
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| Symbol | |
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| ID | 5451753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1704070 |
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| End bp | 1705806 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640875339 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001411064 |
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| Protein GI | 154250239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00697686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGG TTCTCGTAAC GCTTCTTGTT TCTTTATTTG TATTCTTCGC TTTTGCTGCA
AGCTACATCG GTGCAGATGC AACGGGTAAA AAAGGTGGGA CACTCATTCT TCCAACACTT
AGTGGTCCAA GAACAGTTAA CGACACAGTG TCCAAAGAAA CAAGTTCTTC TGATGTCATT
GCCATGTTCA TGAGCTGGGG TGGAACACTT ATCGAAAGAG ATGCGAGAGA CGGTAAGTTC
TATCCAGCAC TCGCGGAAAA ATGGGATGGT CCACGTCTAA CAAAAGATGG CGGTATGGAA
ATTATATGGT ACCTTAGAAA AGGTGTAAAG TGGAGTGATG GTACACCATT CACAGCAGAT
GACGTTGTCT TCACACTCAA CGATATTTAC ACAAACCCAG ATATCCCAAG TTCATTCAAA
GATGTCATAA AGAGTACAAA TAATTACTTA CCAAAAGCAA CAAAGATAAA CGATTACACA
GTTAGAATGT ACTATCCAGA ACCATTTAGG CTTGCTCTCA GATACCTTGG CGGAATGTAC
ATATTCCCAA AACACAAGGC CGAAAGCTGG GTTAAAAACA AAAAATTCGC AGAATTCTGG
ACAGTCGATT CAATCAATAA GAAAGAAATT GTTGGTTTAG GACCATTCAT TCCAGTAGAG
TATGTACCAG ACCAATACGT AAGATTTGTA GCAAATCCGA ATTACTGGAA GAAAGATAAA
AACGGAACAC AATTGCCATA TTTGAAAGAA GTAGTTTACA AAATTATATC TTCACAAGAT
GCACAAAAAT TGGCATTTGA AAAAGGAGAA GTTGATATTT ACTCACCAAG AGGTACAGAA
TTTAACTACT TTAAAGAAAA CGAAAAGAAA TTCAACATAA CCGTTCTCTC ATATGGTCCA
GCATATGGTA CACAATTCAT AACATTCAAC TGGAACAACA AAGACGAGGC AAAGAGAGAC
TGGTTCAGAA ATGTACACTT CAGAAAAGCA GTCGCTTACG CAATGGATAA GAAAAAGATG
ATTGATACAC TCTTCAACGG TCTTGCAATT GAACAATGGT CACCAGTTTC AATGGCTTCA
CCATTCTACA ACGAGAAAGT CACAGTAAAA TATCCATACG ATTTAAATAA AGCAAGAGCA
GAACTTAAAC TCGGTGGATT TAGCTGGGAC AAGAATGGAA AACTCATAGA CAGCAAAGGT
AGACCAGTCA AATTCACAAT CGAAACAAAC GCCGGTAACA CAATCCGTGA AGGTATAGGT
AACATTATAG CAGCTGCTCT AAAACAACTT GGTATGGATA TCACATTTGT ACCTGGTGAT
TTCAACACAC TTGTCAACAG AATGCTCAAC GTTGGCGACT GGGATGCTAT AATCATTGGT
CTAACAGGTG GAGATGAACC ACAAGGTGGA AGAAACGTAT GGGCACTTGA CGGTTCGTTA
CACTTCTGGA ACCTCTCGCC AGAAAATGCA AACTGGGTTG ATCCAAAAAT TTACTGGGTA
CCAGATTTTG AAAAAGAAAT TGATAAGATA TTCAAAGAAA ACGTTAGAAT CCTTGACGAA
AATGTTGTGA AAGACTACTG GGCAAAATTC CAAAAACTCG CATCTGAAAA TATACCACTT
ATTTACACAG TTAACAGCTT AAGACTCTTT GCATGGAGAA ATACAATTAA GAACGTTAAA
ATAACACTCT TGGGAGGAAC AACTTGGAAC CTTGACTGGC TCTATAAAGA AGAATAA
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| Protein sequence | MKKVLVTLLV SLFVFFAFAA SYIGADATGK KGGTLILPTL SGPRTVNDTV SKETSSSDVI
AMFMSWGGTL IERDARDGKF YPALAEKWDG PRLTKDGGME IIWYLRKGVK WSDGTPFTAD
DVVFTLNDIY TNPDIPSSFK DVIKSTNNYL PKATKINDYT VRMYYPEPFR LALRYLGGMY
IFPKHKAESW VKNKKFAEFW TVDSINKKEI VGLGPFIPVE YVPDQYVRFV ANPNYWKKDK
NGTQLPYLKE VVYKIISSQD AQKLAFEKGE VDIYSPRGTE FNYFKENEKK FNITVLSYGP
AYGTQFITFN WNNKDEAKRD WFRNVHFRKA VAYAMDKKKM IDTLFNGLAI EQWSPVSMAS
PFYNEKVTVK YPYDLNKARA ELKLGGFSWD KNGKLIDSKG RPVKFTIETN AGNTIREGIG
NIIAAALKQL GMDITFVPGD FNTLVNRMLN VGDWDAIIIG LTGGDEPQGG RNVWALDGSL
HFWNLSPENA NWVDPKIYWV PDFEKEIDKI FKENVRILDE NVVKDYWAKF QKLASENIPL
IYTVNSLRLF AWRNTIKNVK ITLLGGTTWN LDWLYKEE
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