| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1553 |
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| Symbol | |
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| ID | 5451790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1690629 |
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| End bp | 1692308 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640875328 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001411053 |
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| Protein GI | 154250228 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.208561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG TTTTCATGAC ATTGTTATTG GTAGCAGTTT TCTCGACTTT GGTACTTTCT
GACGTAGTTT ACAAAAGAGA TGAGACGTTG TACGCTGGAG GAGGTATGTG GGCACCACCA
TCAAACTGGA ACCCTATTAC TCCTTGGAAT GCTGTTACTG GTACTGTTGG GCTAATCTAT
GAAACTCTTT ACGGTTACGA CCCACTGAAA GACGAAATGA TTCCATGGCT TGCTGAAAGC
GGAAAGTGGA CATCAAAGAA CACTTACGAG ATTAAACTAA GAAAAGGAGT TACATGGCAC
GATGGTAAAC CATTTACATC AAAAGATGTA AAATTTACAT TTGAGATTGC AAAACAAATA
CCAGAGATTT CCTACAGCCC AGTTTGGACA TGGCTTGCGA AGGTTGATAC TCCAGATGAT
TACACTGTTG TTTTCACATT CTCATCTCCA AGATACCACG AATGGGCATA CCAACTTTAC
CAGCTTCCAA TTATCCCAGA ACACATTTGG TCAAAGCGCT CAAAAGATGA AATATTAAGT
GGAGCAAATG AAAAAGCGAT AGGAACAGGG CCTTATATGT TTGAAACTTA CAGTGACGAC
AGAATGGTTT ACCTCAGAAA TGATAATTGG TGGGGTAACA AAGTTTTTGG GCAACCAAAG
CCAAAGAGAG TTGTTTATTT GAGAGTTCTT AGTAACAACG TTGCACTTGG AATGATAATG
AAAGGTGAAC TTGATATATC GAACTTCTTC CTTCCTGGTG TGCCGACACT TAAGAAAACT
TACAGTGATA TTCATACATG GTTTGACAAA GAACCTTACA TGTTGTCAGA CAACACAGCT
TACTTGTTCA TTAATACAAC AAAGAAACCT CTGAATGATC CAAACTTCAG AAGAGCAATA
GCATTTGCAA TTGATCCAAC AGTTATAGCG AAAACAGTAT TTGAAGGTCA GGTCCTTCCA
TCTAATTCTA TTGGTTTCTT ACCAATTAAG GGTTGGATGA AATATTACCC AGAAAATGCC
GTAAAACAAT ACGGATTTAG ATACGACACA AAGACGGCAA AAGATCTTCT TGATAAGGCA
GGGTACAAAG ATGTTAACAA AGACGGATAT AGAGAGGCAC CAGATGGTAG CAAATTCAAA
GTTGAAATAA TTGTTCCATA TGGTTGGACA GATTGGATGG AATCAATCAA AATAATTGCT
TCTCAGCTTA GGATGGTTGG AATTAATGCA GAAGCAAAAT TCCCAGATTA CAGCAAATAC
TGGGAAGATT TGACAACAGG AAAGTTTGAT ATGGCAATCA ACAACTTCAA CAGTCAGATG
ACGGTTTCAC CATGGACAAT GTTTAATTGG TTATTCAATT CTAACATAAG TGACAATATG
TACAATGGAA ACTTCGGTAA ATATAAAAAT CAAAAACTCT TCGATTTGAT TACACAACTT
AACTCAACAC CAATGGAAGA TATAGCTGCA AACAAGAAAG TATTGGAGCA AATCGCTGAA
ATTTTCTTAA AAGAAATGCC TGCTATTCCT CTTTGGTACA ACGGTATGTG GTTCCAAGCA
AGTACGCAAG TATGGAAGAA CTGGCCAAGT GAGAAAAAAC CATATGCATA TCCAGTTACA
TGGGGTGGAA GATGGCAGAC TGGTGGAGTG TTAATGCTTA TAGGAATTAC CAATAAATAA
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| Protein sequence | MKKVFMTLLL VAVFSTLVLS DVVYKRDETL YAGGGMWAPP SNWNPITPWN AVTGTVGLIY
ETLYGYDPLK DEMIPWLAES GKWTSKNTYE IKLRKGVTWH DGKPFTSKDV KFTFEIAKQI
PEISYSPVWT WLAKVDTPDD YTVVFTFSSP RYHEWAYQLY QLPIIPEHIW SKRSKDEILS
GANEKAIGTG PYMFETYSDD RMVYLRNDNW WGNKVFGQPK PKRVVYLRVL SNNVALGMIM
KGELDISNFF LPGVPTLKKT YSDIHTWFDK EPYMLSDNTA YLFINTTKKP LNDPNFRRAI
AFAIDPTVIA KTVFEGQVLP SNSIGFLPIK GWMKYYPENA VKQYGFRYDT KTAKDLLDKA
GYKDVNKDGY REAPDGSKFK VEIIVPYGWT DWMESIKIIA SQLRMVGINA EAKFPDYSKY
WEDLTTGKFD MAINNFNSQM TVSPWTMFNW LFNSNISDNM YNGNFGKYKN QKLFDLITQL
NSTPMEDIAA NKKVLEQIAE IFLKEMPAIP LWYNGMWFQA STQVWKNWPS EKKPYAYPVT
WGGRWQTGGV LMLIGITNK
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