Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1552 |
Symbol | |
ID | 5453244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1686872 |
End bp | 1690267 |
Gene Length | 3396 bp |
Protein Length | 1131 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640875327 |
Product | fibronectin type III domain-containing protein |
Protein accession | YP_001411052 |
Protein GI | 154250227 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0138471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAT TTTCCGTATT TTTTTTGGTA GTTTTGATGC TAATAAACTT CGCGGCTTTA TCTTTTAGTC AAACAATTCA AACAACACCA TTAGCAAAGT TATATTACGA GTTAAAAGCT CTTTTAGAGA AACCTGATGC TAATCTATCA GACGCAATTA ACCAAATCTT ACAAAAGTAC GCACCTATAG TTGAACCAAT ACTACCTCCG GATGAATATG AAGAATATTC ACTTTCTATG TCTCAGTTAG ATAAAGAGTT AAAGGAAATG GGCATTTGGA TCACGCGAGC AACAGTCGAG ATTTTTAATC AGGAAATTGT TGAAGGACCA TTTGAACTTA ACTACGATCG TGAAACCGGT CAAGCTACAG GTTTAATTAC AAAATTAAAA GCTGGAAAAT ACAATGTAAT AGTTAAAGTT CTTGGACTTG TTGACAACAA GAATGAAAGA ATAGTAGCGT ATGGAAGAGA AGATGGTGTT GAAGTGGTTA GAGATAAAAT ATCTCTGGCT AGCATACCAC TTAAAGTAAT AATTGGAACA GGAGGCGTGC TTGTAAACGC TTTACTCGAT TTTCAAAATT CAGAATTTAT TCCTGGAGAT ATTGGGTCAA TCGAGCCATC TGATGGTGAA AAAGATGTTT TACCAACTGT AACCCTCAAG TGGGATTCGC TCCGCGCAAA AGCTTACGAT ATCTATTTCG GTGAAGAAGG CAATTTGGAA ATTAAAGAAA AGAATTACTT TGACAAGGAA TACACAATAG AAGGACTTAA GCCAAGTACA ACTTATCAAT GGAAAATTGT TGCTAAAAAT GCATTTGGCG AAGTGGAAAG CCCTGTCTTC AGTTTCAGAA TAGGTGACGC CCCAACTGCC CCAGCGACTC CTGTGCCATA CGATGGTGCT GCCAAAGTTT GGATACAACC AACCTTAATG TGGGAATCTG AAAAAGCCGC AAGTTTTGAT ATTTTTATAA GTGAAAGGCC AGATCAGTTA GAATTTGTAG CTAACGTATC AGAACCAAAA TACGATTTAC AAAATCTAAA GTTAGGTACA ACATATTATT GGAAAGTTAT TGCAAAGAAT GCATATGGTG AAACAGAGGG ACCAGTATGG ATATTCACAA CAGGTGATGT ACCGACAAAA CCCATGCTTA AAGAACCAAC TGGCGAAAAA GTTTGGATAC AACCAACATT CAGATGGGAA AGCGAAGATG CCAACGAATA TGAATTATAC CTTGGCCAAG AGTACGATAG TTTAGAACTT GTTGCCACGA CAACAGATGC AGAATACACA ATACCATACG ATTTGCCAAT GGATACAACG TTCTTCTGGA AAGTTGTTGC TAAAAATGAC TTCGGCGAAA ATGTAAGCGA TGTCGAGATG TTCAAAACAG GAAAAGCACC TATATTTATA GGTGTTGTTC AACCTCTCGA TGGTGAAGAA GACGTTTGGA AATCGCCAAT TCTTGAATGG GAATTCGAAT GCGCAGATAA ATACGATGTG TACCTCGGTA CTTCATCGGA AGAATTAGAC CTCATCGCTC AAGATGCAAC ACCAAATACC TTAGAACTTA AAGACCTTGA ACTTGGTAAA ACATACTATT GGAAAGTCGT TGGAAAGAAT AGATTCGGTG AAACCGAAAG TCCTGTATGG AAGTTTACAG TTGGTAATGT GCCCGCTGTA CCATTTAACC CGGAACCAAC CGATGGTGCC CTTGATCAAT TCAATAATCT TGTCCTCAGA TGGGAAAGTT CAAAAGCGGA CAGTTATGAC CTTTACATAG GATTTGCTGA AGACAAACTT GAGCTCTATC AAGCAGACAT TAAAGAGAGC GCTGTTGAAT TATACGACTT ACTATTTGGC ACAACATACT ATTGGAAAGT TGTCGCGAAA AACAGATTTG GAAATACAGA AGGGCCTATA TGGAAATTTA CAACTGGGCA AATTCCAGAA AAACCAATCG CAATTTATCC AGAAGATGGA AGCATTGTAC CTATAGATGT TACACTGAAG TGGCAGAGCG AAAGAGCGGA AGAGTTTGAC CTATTCTTTG GTACAACAAC TTTTGAAAAG ATTGCAACTT TGAATGAAAA TGAATATAAA CTACCAGAAT TACACTTCGG AACGTGGTAC AAATGGAAAG TTGTTGCAAG AAATGTCTTT GGAGAAACTG AAAGTGAATT CAAATTTATG ACAATTTTAC CAAAAGTTGA AAAGCAGTTA TCTATCGGTG GAACAAAGTC AGATGCAGGT AAGAAGCTGA TAAAAACATC TGATGGTGGT TACATACTTG TTGGAAACAC TCAATCACCT GATGTTGAAG GTTTCAAAGG TGAATCTGAT ATATTAGTAG TAAAACTAAA TAAAGATTTA GAGGTTGAAT GGAAGAAAGT CTTAGGTGGA ACTGGTTGGG ATGAAGGAAC AGATGTATTT GAATACGATG AAGGATACAT TGTAGTTGGT TACACACTTT CCTCTGAAAT AGATAATCAA AAGAACAAAG GTGGTTGGGA TTATCTCGTT GTAAAACTTG ATAAACAAGG CAACGTAATA TGGGCAAAAC TTTTCGGTGG CACTGGTAAT GATATAGCAC AAAAAGGTTT AGCTACATCC GATGGTAACT TCTTAGTTGT GGGAACAACA AATTCAGTAA ATGGTGACAC TGGTGGAAAT ATCGGAACTT GGGATACATG GATTTTAAAA ATCAATAAAG ATGGTGAAAT GCTTGCAAGT AAAACATTCG GTGGTCTTGA TAGAGATAAA GGCGTAGACA TTATCGAAGT CGAAGATGGC TATATTGTTG CTAATGTTAC ATACTCTCTC GAAGGAAATA TACCATACAA CCATGGTAGT TCCGATATCT GGTTGTTCAA AGTAACGAAA GACTTAAAAG AAATAACTCT CAACAAAGCT TATGGTGGTA GTGACCAAGA TGAAGTAGCA AAAATACTCA AGACAAAAGA TGGGAACTTG TTAATCGTTG GTTACACAAC ATCTGTCGAT GGAGATGTAC AAAAGAACGC TGGATATTGG GATGTATGGG TTGTAAAGGT TGATATGCTT GGTAACATAA TTTGGCAAAA AACATACGGT GGAAGTGAAG AAGATATAGC TTACAATGTA GCAGAGTTCC CAGATGGTGG ATTTGCAATA GTTGGTCATA CACTCTCTAA GTTCGATGAT TACAAAGGTG GAGTAGATAT ATTAGTGCTT GATATCGACA ACGATGGAAA TCTCAGATGG AGTAAAACAT ACGGTGGAAC ATTGGCAGAC TATTCTTACA GCGTATATGT GGAAGAAGAT AAATCGATAG TTGTTTTAGG AACAACGTTC TCGAAAAATA ATGATATAAC AACTAACTTA GGTGGTAGTG ACATATTAAT TTTGAAAATC AAATGA
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Protein sequence | MKRFSVFFLV VLMLINFAAL SFSQTIQTTP LAKLYYELKA LLEKPDANLS DAINQILQKY APIVEPILPP DEYEEYSLSM SQLDKELKEM GIWITRATVE IFNQEIVEGP FELNYDRETG QATGLITKLK AGKYNVIVKV LGLVDNKNER IVAYGREDGV EVVRDKISLA SIPLKVIIGT GGVLVNALLD FQNSEFIPGD IGSIEPSDGE KDVLPTVTLK WDSLRAKAYD IYFGEEGNLE IKEKNYFDKE YTIEGLKPST TYQWKIVAKN AFGEVESPVF SFRIGDAPTA PATPVPYDGA AKVWIQPTLM WESEKAASFD IFISERPDQL EFVANVSEPK YDLQNLKLGT TYYWKVIAKN AYGETEGPVW IFTTGDVPTK PMLKEPTGEK VWIQPTFRWE SEDANEYELY LGQEYDSLEL VATTTDAEYT IPYDLPMDTT FFWKVVAKND FGENVSDVEM FKTGKAPIFI GVVQPLDGEE DVWKSPILEW EFECADKYDV YLGTSSEELD LIAQDATPNT LELKDLELGK TYYWKVVGKN RFGETESPVW KFTVGNVPAV PFNPEPTDGA LDQFNNLVLR WESSKADSYD LYIGFAEDKL ELYQADIKES AVELYDLLFG TTYYWKVVAK NRFGNTEGPI WKFTTGQIPE KPIAIYPEDG SIVPIDVTLK WQSERAEEFD LFFGTTTFEK IATLNENEYK LPELHFGTWY KWKVVARNVF GETESEFKFM TILPKVEKQL SIGGTKSDAG KKLIKTSDGG YILVGNTQSP DVEGFKGESD ILVVKLNKDL EVEWKKVLGG TGWDEGTDVF EYDEGYIVVG YTLSSEIDNQ KNKGGWDYLV VKLDKQGNVI WAKLFGGTGN DIAQKGLATS DGNFLVVGTT NSVNGDTGGN IGTWDTWILK INKDGEMLAS KTFGGLDRDK GVDIIEVEDG YIVANVTYSL EGNIPYNHGS SDIWLFKVTK DLKEITLNKA YGGSDQDEVA KILKTKDGNL LIVGYTTSVD GDVQKNAGYW DVWVVKVDML GNIIWQKTYG GSEEDIAYNV AEFPDGGFAI VGHTLSKFDD YKGGVDILVL DIDNDGNLRW SKTYGGTLAD YSYSVYVEED KSIVVLGTTF SKNNDITTNL GGSDILILKI K
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