Gene Fnod_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1552 
Symbol 
ID5453244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1686872 
End bp1690267 
Gene Length3396 bp 
Protein Length1131 aa 
Translation table11 
GC content37% 
IMG OID640875327 
Productfibronectin type III domain-containing protein 
Protein accessionYP_001411052 
Protein GI154250227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0138471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAT TTTCCGTATT TTTTTTGGTA GTTTTGATGC TAATAAACTT CGCGGCTTTA 
TCTTTTAGTC AAACAATTCA AACAACACCA TTAGCAAAGT TATATTACGA GTTAAAAGCT
CTTTTAGAGA AACCTGATGC TAATCTATCA GACGCAATTA ACCAAATCTT ACAAAAGTAC
GCACCTATAG TTGAACCAAT ACTACCTCCG GATGAATATG AAGAATATTC ACTTTCTATG
TCTCAGTTAG ATAAAGAGTT AAAGGAAATG GGCATTTGGA TCACGCGAGC AACAGTCGAG
ATTTTTAATC AGGAAATTGT TGAAGGACCA TTTGAACTTA ACTACGATCG TGAAACCGGT
CAAGCTACAG GTTTAATTAC AAAATTAAAA GCTGGAAAAT ACAATGTAAT AGTTAAAGTT
CTTGGACTTG TTGACAACAA GAATGAAAGA ATAGTAGCGT ATGGAAGAGA AGATGGTGTT
GAAGTGGTTA GAGATAAAAT ATCTCTGGCT AGCATACCAC TTAAAGTAAT AATTGGAACA
GGAGGCGTGC TTGTAAACGC TTTACTCGAT TTTCAAAATT CAGAATTTAT TCCTGGAGAT
ATTGGGTCAA TCGAGCCATC TGATGGTGAA AAAGATGTTT TACCAACTGT AACCCTCAAG
TGGGATTCGC TCCGCGCAAA AGCTTACGAT ATCTATTTCG GTGAAGAAGG CAATTTGGAA
ATTAAAGAAA AGAATTACTT TGACAAGGAA TACACAATAG AAGGACTTAA GCCAAGTACA
ACTTATCAAT GGAAAATTGT TGCTAAAAAT GCATTTGGCG AAGTGGAAAG CCCTGTCTTC
AGTTTCAGAA TAGGTGACGC CCCAACTGCC CCAGCGACTC CTGTGCCATA CGATGGTGCT
GCCAAAGTTT GGATACAACC AACCTTAATG TGGGAATCTG AAAAAGCCGC AAGTTTTGAT
ATTTTTATAA GTGAAAGGCC AGATCAGTTA GAATTTGTAG CTAACGTATC AGAACCAAAA
TACGATTTAC AAAATCTAAA GTTAGGTACA ACATATTATT GGAAAGTTAT TGCAAAGAAT
GCATATGGTG AAACAGAGGG ACCAGTATGG ATATTCACAA CAGGTGATGT ACCGACAAAA
CCCATGCTTA AAGAACCAAC TGGCGAAAAA GTTTGGATAC AACCAACATT CAGATGGGAA
AGCGAAGATG CCAACGAATA TGAATTATAC CTTGGCCAAG AGTACGATAG TTTAGAACTT
GTTGCCACGA CAACAGATGC AGAATACACA ATACCATACG ATTTGCCAAT GGATACAACG
TTCTTCTGGA AAGTTGTTGC TAAAAATGAC TTCGGCGAAA ATGTAAGCGA TGTCGAGATG
TTCAAAACAG GAAAAGCACC TATATTTATA GGTGTTGTTC AACCTCTCGA TGGTGAAGAA
GACGTTTGGA AATCGCCAAT TCTTGAATGG GAATTCGAAT GCGCAGATAA ATACGATGTG
TACCTCGGTA CTTCATCGGA AGAATTAGAC CTCATCGCTC AAGATGCAAC ACCAAATACC
TTAGAACTTA AAGACCTTGA ACTTGGTAAA ACATACTATT GGAAAGTCGT TGGAAAGAAT
AGATTCGGTG AAACCGAAAG TCCTGTATGG AAGTTTACAG TTGGTAATGT GCCCGCTGTA
CCATTTAACC CGGAACCAAC CGATGGTGCC CTTGATCAAT TCAATAATCT TGTCCTCAGA
TGGGAAAGTT CAAAAGCGGA CAGTTATGAC CTTTACATAG GATTTGCTGA AGACAAACTT
GAGCTCTATC AAGCAGACAT TAAAGAGAGC GCTGTTGAAT TATACGACTT ACTATTTGGC
ACAACATACT ATTGGAAAGT TGTCGCGAAA AACAGATTTG GAAATACAGA AGGGCCTATA
TGGAAATTTA CAACTGGGCA AATTCCAGAA AAACCAATCG CAATTTATCC AGAAGATGGA
AGCATTGTAC CTATAGATGT TACACTGAAG TGGCAGAGCG AAAGAGCGGA AGAGTTTGAC
CTATTCTTTG GTACAACAAC TTTTGAAAAG ATTGCAACTT TGAATGAAAA TGAATATAAA
CTACCAGAAT TACACTTCGG AACGTGGTAC AAATGGAAAG TTGTTGCAAG AAATGTCTTT
GGAGAAACTG AAAGTGAATT CAAATTTATG ACAATTTTAC CAAAAGTTGA AAAGCAGTTA
TCTATCGGTG GAACAAAGTC AGATGCAGGT AAGAAGCTGA TAAAAACATC TGATGGTGGT
TACATACTTG TTGGAAACAC TCAATCACCT GATGTTGAAG GTTTCAAAGG TGAATCTGAT
ATATTAGTAG TAAAACTAAA TAAAGATTTA GAGGTTGAAT GGAAGAAAGT CTTAGGTGGA
ACTGGTTGGG ATGAAGGAAC AGATGTATTT GAATACGATG AAGGATACAT TGTAGTTGGT
TACACACTTT CCTCTGAAAT AGATAATCAA AAGAACAAAG GTGGTTGGGA TTATCTCGTT
GTAAAACTTG ATAAACAAGG CAACGTAATA TGGGCAAAAC TTTTCGGTGG CACTGGTAAT
GATATAGCAC AAAAAGGTTT AGCTACATCC GATGGTAACT TCTTAGTTGT GGGAACAACA
AATTCAGTAA ATGGTGACAC TGGTGGAAAT ATCGGAACTT GGGATACATG GATTTTAAAA
ATCAATAAAG ATGGTGAAAT GCTTGCAAGT AAAACATTCG GTGGTCTTGA TAGAGATAAA
GGCGTAGACA TTATCGAAGT CGAAGATGGC TATATTGTTG CTAATGTTAC ATACTCTCTC
GAAGGAAATA TACCATACAA CCATGGTAGT TCCGATATCT GGTTGTTCAA AGTAACGAAA
GACTTAAAAG AAATAACTCT CAACAAAGCT TATGGTGGTA GTGACCAAGA TGAAGTAGCA
AAAATACTCA AGACAAAAGA TGGGAACTTG TTAATCGTTG GTTACACAAC ATCTGTCGAT
GGAGATGTAC AAAAGAACGC TGGATATTGG GATGTATGGG TTGTAAAGGT TGATATGCTT
GGTAACATAA TTTGGCAAAA AACATACGGT GGAAGTGAAG AAGATATAGC TTACAATGTA
GCAGAGTTCC CAGATGGTGG ATTTGCAATA GTTGGTCATA CACTCTCTAA GTTCGATGAT
TACAAAGGTG GAGTAGATAT ATTAGTGCTT GATATCGACA ACGATGGAAA TCTCAGATGG
AGTAAAACAT ACGGTGGAAC ATTGGCAGAC TATTCTTACA GCGTATATGT GGAAGAAGAT
AAATCGATAG TTGTTTTAGG AACAACGTTC TCGAAAAATA ATGATATAAC AACTAACTTA
GGTGGTAGTG ACATATTAAT TTTGAAAATC AAATGA
 
Protein sequence
MKRFSVFFLV VLMLINFAAL SFSQTIQTTP LAKLYYELKA LLEKPDANLS DAINQILQKY 
APIVEPILPP DEYEEYSLSM SQLDKELKEM GIWITRATVE IFNQEIVEGP FELNYDRETG
QATGLITKLK AGKYNVIVKV LGLVDNKNER IVAYGREDGV EVVRDKISLA SIPLKVIIGT
GGVLVNALLD FQNSEFIPGD IGSIEPSDGE KDVLPTVTLK WDSLRAKAYD IYFGEEGNLE
IKEKNYFDKE YTIEGLKPST TYQWKIVAKN AFGEVESPVF SFRIGDAPTA PATPVPYDGA
AKVWIQPTLM WESEKAASFD IFISERPDQL EFVANVSEPK YDLQNLKLGT TYYWKVIAKN
AYGETEGPVW IFTTGDVPTK PMLKEPTGEK VWIQPTFRWE SEDANEYELY LGQEYDSLEL
VATTTDAEYT IPYDLPMDTT FFWKVVAKND FGENVSDVEM FKTGKAPIFI GVVQPLDGEE
DVWKSPILEW EFECADKYDV YLGTSSEELD LIAQDATPNT LELKDLELGK TYYWKVVGKN
RFGETESPVW KFTVGNVPAV PFNPEPTDGA LDQFNNLVLR WESSKADSYD LYIGFAEDKL
ELYQADIKES AVELYDLLFG TTYYWKVVAK NRFGNTEGPI WKFTTGQIPE KPIAIYPEDG
SIVPIDVTLK WQSERAEEFD LFFGTTTFEK IATLNENEYK LPELHFGTWY KWKVVARNVF
GETESEFKFM TILPKVEKQL SIGGTKSDAG KKLIKTSDGG YILVGNTQSP DVEGFKGESD
ILVVKLNKDL EVEWKKVLGG TGWDEGTDVF EYDEGYIVVG YTLSSEIDNQ KNKGGWDYLV
VKLDKQGNVI WAKLFGGTGN DIAQKGLATS DGNFLVVGTT NSVNGDTGGN IGTWDTWILK
INKDGEMLAS KTFGGLDRDK GVDIIEVEDG YIVANVTYSL EGNIPYNHGS SDIWLFKVTK
DLKEITLNKA YGGSDQDEVA KILKTKDGNL LIVGYTTSVD GDVQKNAGYW DVWVVKVDML
GNIIWQKTYG GSEEDIAYNV AEFPDGGFAI VGHTLSKFDD YKGGVDILVL DIDNDGNLRW
SKTYGGTLAD YSYSVYVEED KSIVVLGTTF SKNNDITTNL GGSDILILKI K