Gene Fnod_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1538 
Symbol 
ID5451847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp1667847 
End bp1668503 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content36% 
IMG OID640875311 
Productflagellar hook capping protein 
Protein accessionYP_001411038 
Protein GI154250213 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGA ACGTAAACTC GATGTCTAAT CTATTCTCAA CGTCAACCGA TCGAACCACG 
AAAAAAGATT TAGATAAAGA AGCTTTTTTA AAGTTGCTAA TCACACAACT CAAGAGCCAA 
GATCCTCTCG AGCCTATGAA GGATAGAGAC TTCATAGCTC AAATGTCTCA ATTATCATCA 
CTTGAGCAGG TTATGAACAT GAGTAAATCG GTCCAAAGTT TCGTTGACAC CGCCGCTCAA 
CTTTACAGAA CGCAAGCTGT ATCTATGATT GGTAAGACCG CAGTTGTGAA AACAAATGTT 
ATCAATGTTG AAAACGGTGT CCCCGAATCA AAAGTATTTA ATTTAGATTC TCCAGCGAAC 
ATTGTAATAA AAATATTTGA TTCAAACGGG AAATTAATAA AAGAAGAGAA AATTGGTCAA 
GTTGAGGCAG GAATGCAACT CTTCGCTTGG GATGGAAAAG ACGAAAATGG CACAAAAGTA 
AAAGATGGTA GATACACATT TAAGATATTA AAAACAACTC CAGATGGCGG ATATGAAGAA 
ATCCCAAGTG TTGAGAGTGG AATTGTATCA GGTGTTCAAT TTGATGGAAA TAAAATAAAT 
GTTATAGTTA GCAACAAAAT ATATGACATA TCCGAAATTT CCGAAATACA TGCGTAA
 
Protein sequence
MMMNVNSMSN LFSTSTDRTT KKDLDKEAFL KLLITQLKSQ DPLEPMKDRD FIAQMSQLSS 
LEQVMNMSKS VQSFVDTAAQ LYRTQAVSMI GKTAVVKTNV INVENGVPES KVFNLDSPAN 
IVIKIFDSNG KLIKEEKIGQ VEAGMQLFAW DGKDENGTKV KDGRYTFKIL KTTPDGGYEE 
IPSVESGIVS GVQFDGNKIN VIVSNKIYDI SEISEIHA