Gene Fnod_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1503 
Symbol 
ID5452820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp1632633 
End bp1633613 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content29% 
IMG OID640875276 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001411003 
Protein GI154250178 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA TAAAAGCAAC AAATGAAAAT ATACAAAAAA TAGCAGAATT AATATATTCT 
GAAAAGTCTG AGTTTTTTGA TGAATTATTT GGCAATAAAG CTATAGATTA TATATCAAAG 
GCTTTAGAAG AAGATATACC ACCTTTTATC AAGCAGAACA TGTTACTATT GACAGATGGT 
AAAGAAATTA AAAGCGTTTT ACTTTATGCA ACAAAAGCTG GTTTTCGACA TGGTTATCAA 
AAATGGTTTA AATTACTTGG CTTCAAGATA ATTCCTGTTG GTTCGAAGAT GATATACATT 
ATAGAGAGAA TATTGATGGA TTTTTCTGTG GATGATCTTT ACATAATATC TCTCTCAGGT 
GAAATGAAGG AATTTTTACT ATATAAATTT ATGAAAGAAA ACAGATACAA GAAAATTATA 
GTGGATACCT TTAAAACATC TATATTCGAA AAATTCGGAT TCCAAGAATC AAAATCTGTA 
CATCCAAAAA TGAAACGCTT TTCAAGAATA AGCGATTATC AGACTTTTAC AGGTATCGGC 
TGGGATACAC ACCCTCTTGT TGAAAGCAGA AATTTAGTAA TTGGCGGTGT TGATATAGAA 
TCTAACATGG GATTATTAGG ACATTCAGAT GCAGATGTTT TGACACACGC AATAATAGAC 
AGCATAGTAG GAATAACGCA TAAAAAAGAT ATAGGTGTAC TGTTTCCAGA AAATGAGTCA 
AATAAAGACA GAAGAAGTAT CGATATGCTA GAAGAAGTAA CAAAATATGT TATTTCATCA 
GGCTTCTTTC CATCTTCAAT AGATTGTGTT ATAATTTCTC CGATAAAATT AAAAGACTAT 
AGGGAAAAAA TTACTCAAAA TCTTGAGAAT ATACTTAATT GTCAAGTTTC GGTTAAATTT 
AAAAGTGGGA ACAATGTATA TCCAGAATCG CAAAATAAAG GTATAACAGC AATATGCATA 
AGTAATATTG ATAAAATATA A
 
Protein sequence
MNIIKATNEN IQKIAELIYS EKSEFFDELF GNKAIDYISK ALEEDIPPFI KQNMLLLTDG 
KEIKSVLLYA TKAGFRHGYQ KWFKLLGFKI IPVGSKMIYI IERILMDFSV DDLYIISLSG 
EMKEFLLYKF MKENRYKKII VDTFKTSIFE KFGFQESKSV HPKMKRFSRI SDYQTFTGIG 
WDTHPLVESR NLVIGGVDIE SNMGLLGHSD ADVLTHAIID SIVGITHKKD IGVLFPENES 
NKDRRSIDML EEVTKYVISS GFFPSSIDCV IISPIKLKDY REKITQNLEN ILNCQVSVKF 
KSGNNVYPES QNKGITAICI SNIDKI