| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1488 |
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| Symbol | |
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| ID | 5452595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1615711 |
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| End bp | 1617015 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640875261 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_001410988 |
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| Protein GI | 154250163 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.023549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCGT ACGATGTAAT ACTGAAAAAG AGAAATGGTG GAAAACTTAC AAAAGAAGAA
ATAGAGTTCA TGGTAAATGG ATACGTAAAA GGTGAAATTC CTGATTATCA AATGGCCGCA
TTTTTAATGG CCATTTATTT TAGACATATG GATAGTGAAG AAAGGGCAAC ACTAACAAAG
GTAATGGCAG ATTCAGGAGA TAAAATAGAC CTTTCGCCTA TCCCAGGTAT AAAAATTGAT
AAACATTCCA CAGGTGGTGT GGGAGATAAG ACAACTTTAG TCGTTGGACC TATCGTCGCT
TCGCTCGGTG TACCTGTTGC CAAAATGTCT GGTCGAGCAC TCGGGCACAC AGGCGGTACA
ATCGACAAAT TGGAATCTAT ACCAGGTTTT AGAACATCTC TTAGCGAGGA AGAATTCTTT
GAAAATGTCA GAAAAATAGG TATTGCGATA GTTGGTCAGA CAGCGAACTT GGTTCCAGCA
GATAAGAAAA TATACGCACT TAGAGATGCG ACTGCAACTG TCGATGAAGT ATCACTTATC
GCAGCAAGTA TAATGAGCAA AAAACTAGCC GGTGGAGCTG ATGGATTTGT TCTCGACGTA
AAAGTCGGTA GTGGCGCGTT TATGAAAACA TTGGAACAAG CAAAAGAACT CGCGGAAGCG
ATGGTGGATA TAGCAAAATC TCATGGAAAA AAAGCTGTGG CAGTGCTAAC CAATATGGAC
GTTCCACTTG GCAAAATGGT AGGAAATTCT CTAGAAGTAC TGGAAGCTAT TGAAACACTA
AAATGCAATG GACCAGATGA CTTCACAGAA TTGTGTTTAA ACATATCTGC TTGGATGTGT
CACTTAGCGG AAAAAGGCAC ATTTGAAGAA TGTCTGAAAA TGTCTAAAGA AGCTCTTGAA
AGTGGAGCTG CATTGAACAA ATTCCGCGAA TTAGTAAAAT ACCAAGGTGG CAATCCTGAA
GTTGTTGATA GACCAAGAGA AATTTTACCA ATGACAGACA ATATAGTTGA ATTCAAAGCA
AAAGTTGAAG GATATATAAC AGCTATCGAT ACCGAAAAAA TCGGAATTGC TTCAAATTAC
CTTGGTGCAG GCAGGAAAAC CAAAGAAGAT ACAATAGACT ACAGAGTTGG AATAGAAATC
ACAAAGAAAA TAGGAGATTA TGTGCATCCT GGTGACACAA TTGCAAAAAT GTATGTTAGT
GAGAAAAGCG AAATCAACGA TGCTGTAAAA TTACTCGAAG AAAGTTACAA AATCTCTCAA
GAAAAACCTC AAGTAAAACC AATAATACTT TCAATTGTAA AATAA
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| Protein sequence | MRAYDVILKK RNGGKLTKEE IEFMVNGYVK GEIPDYQMAA FLMAIYFRHM DSEERATLTK
VMADSGDKID LSPIPGIKID KHSTGGVGDK TTLVVGPIVA SLGVPVAKMS GRALGHTGGT
IDKLESIPGF RTSLSEEEFF ENVRKIGIAI VGQTANLVPA DKKIYALRDA TATVDEVSLI
AASIMSKKLA GGADGFVLDV KVGSGAFMKT LEQAKELAEA MVDIAKSHGK KAVAVLTNMD
VPLGKMVGNS LEVLEAIETL KCNGPDDFTE LCLNISAWMC HLAEKGTFEE CLKMSKEALE
SGAALNKFRE LVKYQGGNPE VVDRPREILP MTDNIVEFKA KVEGYITAID TEKIGIASNY
LGAGRKTKED TIDYRVGIEI TKKIGDYVHP GDTIAKMYVS EKSEINDAVK LLEESYKISQ
EKPQVKPIIL SIVK
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