Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1474 |
Symbol | |
ID | 5452203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1598000 |
End bp | 1598872 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640875247 |
Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
Protein accession | YP_001410974 |
Protein GI | 154250149 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATT CCGAACTTTT AGAAATTTGG AAAGAGACGA ATTTAGAATT CAGTGAAATA ATATTAGCTC AAGAGATGAT AGAAACTGGA AGAGACCCAG AAAGGGTTAA AGAAAATCTT AGAAGATTGA TGAATGTAAT TCTAGAAGAA TCTGAGAAAA ATATCGGAAA AAAATTCGAA ACTCTTACGG GTATGACGGG AGATAATGGA TTAAAATTTT ATAAACACTC TCCGAAAATG GTAAGCGAGT TTAATCATTT AGCTACCACA GTAGCTATTT CCATGGGTGA ATCGAATGCT TCTATGGGTC GTATCGTCGC ATGTCCAACA GCTGGTTCGT GTGGTGTGGT TCCAGGAGCG TTATACGCTT TGAAAAAAAC ATACAACGCA AACGAGGAAG ATTTATTGAA ATCGTTTATC GTAGGTTCTG GGGTAGGAAA CGTTGTAGCG AATAAAGCTA CACTTTCAGG GGCTGCTGGT GGTTGCCAAG CCGAGATAGG TACTGCAACA GCAATGGCTT CTGCTATTTT AACTTATTAT TTTTCAAAAG ACCCTGTAAA AGTCGGACAC GCTGCAGCGT TATCTTTCAA GTCGCTCATG GGGCTTGTTT GTGACCCAGT AGGAGGATTT GTTGAAGTAC CATGTGTTAA GAGGAATGGT TCAGCAGTTA ATGTAGCAAT TATTTGCAGT GAAATGGCGT TGGCTGGCAT TGAAAGTGTA ATTCCATTCG ACGAAGTTGT CGAGGCTATG TACAACGTTG GAAAATCTTT GCCGGAAAGT CTTAGAGAAA CTGGCATCGG TGGAATTGCC GGGACTAAAA CTGCGCAGCA AATCGTTGAA AAAATCAAAG AAAATTGGAG TAAAAATACT TAG
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Protein sequence | MKYSELLEIW KETNLEFSEI ILAQEMIETG RDPERVKENL RRLMNVILEE SEKNIGKKFE TLTGMTGDNG LKFYKHSPKM VSEFNHLATT VAISMGESNA SMGRIVACPT AGSCGVVPGA LYALKKTYNA NEEDLLKSFI VGSGVGNVVA NKATLSGAAG GCQAEIGTAT AMASAILTYY FSKDPVKVGH AAALSFKSLM GLVCDPVGGF VEVPCVKRNG SAVNVAIICS EMALAGIESV IPFDEVVEAM YNVGKSLPES LRETGIGGIA GTKTAQQIVE KIKENWSKNT
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