Gene Fnod_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1454 
Symbol 
ID5452048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp1577946 
End bp1579058 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content36% 
IMG OID640875227 
ProductUDP-galactopyranose mutase 
Protein accessionYP_001410954 
Protein GI154250129 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTG ATGCCGTAGT AGTTGGTGCA GGTTTAGCTG GCTCAACAGC AGCAAGAATC 
TTGGCTGAAA GTGGTAGAAA GGTTTTAGTT ATCGAAAAGC ATAAACACAT CGCTGGTCAC 
TGCCATGATT ACAAAGATAA TAATGGCATA ACGGTTCACA CTTATGGTCC ACACATATTT 
CACACAAACA ATAAGACAGT TTGGGAATTC GTCAATAAGT TCACTGAATT CAATTATTAT 
CAACACAAAG TTCTAAGCTA CGCAGAGGGT AAATTAATAC CCTTTCCGAT CAATAGAGAT 
ACTTTGTGCG AAGTTTTCGG CATCAATATT GCCACATACG AAGTTGAAGA GTTTTTATCA 
AATGAAGTTA AGAAATCAAA ATTCAACAAT CCTCCTAAAA ATTTCCGCGA TGTTATTGTC 
TCACAAGTTG GCGAAAGGCT TTATGAGCTT TTCTTCAAAA ATTATACTAT TAAACAATGG 
GAACGAGATC CTGAAGAACT ATTACCCGAT GTAGCAAAAA GAATACCTGT AAGGGCCAAC 
AGAGACGACA GGTACTTCTC TGATAAATAT CAAGGCATAC CAAAATACGG TTACACAAAA 
CTCGTCGAAA ATATTCTGAA CCATGACAAC ATTACAGTGA TGATGGGAAT AGATTATTTT 
GAAATCAGAG ATTACCTGAA ATCAAGCCTT GTAGTATATA CTGGTGAATT GGACAGATTT 
TTTGATTTTT CGCATGGAAA GTTAGAGTAC AGGTCTTTAA ATCTTGTATT GAAAACGTTT 
GATATAGAGT TCTACCAACC GGTTGCTGTG GTTAATTACC CAAACGACTA TGACTGGACC 
AGAATAACTG AATACAAACA TTTTCTTGAT GAAAAATCTT CGAAAACTAC TGTTTGTTTT 
GAATATCCAA CAGCACATGG CAAACCATAC TACATAGTTA TGACAAGTGA AAACATGGAA 
AGAAGGAAAA AATATACTGA GGAAGTCGAA AGATTAGAAA GGACAGGTGA ATATATATTT 
GTCGGAAGAT TAGCGGAATA CAAGTACTAT AACATGGATG AAGTAATAAC AGCTTCAATT 
AGGAAGACAG AGGTGTGGTT AAATGGAAGG TAA
 
Protein sequence
MFFDAVVVGA GLAGSTAARI LAESGRKVLV IEKHKHIAGH CHDYKDNNGI TVHTYGPHIF 
HTNNKTVWEF VNKFTEFNYY QHKVLSYAEG KLIPFPINRD TLCEVFGINI ATYEVEEFLS 
NEVKKSKFNN PPKNFRDVIV SQVGERLYEL FFKNYTIKQW ERDPEELLPD VAKRIPVRAN 
RDDRYFSDKY QGIPKYGYTK LVENILNHDN ITVMMGIDYF EIRDYLKSSL VVYTGELDRF 
FDFSHGKLEY RSLNLVLKTF DIEFYQPVAV VNYPNDYDWT RITEYKHFLD EKSSKTTVCF 
EYPTAHGKPY YIVMTSENME RRKKYTEEVE RLERTGEYIF VGRLAEYKYY NMDEVITASI 
RKTEVWLNGR