| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1446 |
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| Symbol | |
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| ID | 5452232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1568444 |
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| End bp | 1570900 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640875218 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001410946 |
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| Protein GI | 154250121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTAAAA ACTCTAAAAT TGACATAACA AATCAATTTA CATATCATCT CAATCACACA
TTAGCTGAAA ATAAAGACTT TTCAACAACT CTGCAGAAAT TTTTTGCACT ATCTTACTCC
ATTAGAGACA TCGTTGCAGA AAAATGGCTT AGAACCGAAG AAATCATACA TCAAAGGAAA
GATTTAAGAA TTGTCAATTA CTTATCAATG GAGTTTTTGA TAGGTAGACT GTTGTACAAC
AACATATTGA ACTTGCAAGT TGAAGATGAG GTGAAAGCTC TTCTTAAAAA ATTTGATTTA
GACCTTGATA AAATAGCATT ACTTGAAGAA GATGCTGCTC TCGGTAACGG CGGACTCGGG
AGACTCGCTG CATGTTTCTT AGACTCGTTG GCAACTCTTG GATATCTATC ATACGGTTAT
ACGATAAGAT ACCAATATGG TCTCTTCAAA CAAACAATCG AAAATGGATT CCAAAAAGAA
ATGCCAGATG ATTGGCTAAA AAATGGTTAT CCTTGGGAAT TTCCAAAACC CGAAGAAGCT
GTAACTGTTA AGTTTTTTGG AAGAAGTGAA CCTTACACCG ATGAAAAAGG TAACATTAGA
TTCAAATGGG TGGATACGTA CGATATATTA GCCGTACCAT ATGATATTTA CATAACCGGC
TACAACAGTG ACATCGTTTC AGTATTAAGA CTTTGGCATC CTAAAGCTAT AAACGAATTT
AACTTTGCGG AGTTTGAGAA GGGTAATTAT GAAAAAGCCG TTTACGAGAA AAATCTTGCG
GAAACATTGT GCAAAGTTCT TTATCCAAAC GACGCATTTT ACCAAGGTAG GGAATTAAGG
CTCAAGCAAG AACATTTCTT TGTAAGCGCC GCATTACAAG ATATAATAAG AAGGCACAAG
AGAAGATTTG GGAACGATTT AAGTAACCTT CATGAATCCG AAGTTATACA ACTCAACGAC
ACGCATCCTG CCCTTGCAAT ACCAGAACTT ATGAGAATAT TACTCGACGA AGAAGGATAC
GGTTGGGATG ATGCCTGGAA CATAGTCAAA AACACAATAG CTTACACAAA CCATACTGTA
ATGCCTGAAG CACTTGAAAA ATGGGAGGCC CCATTACTCC AAAATCTCCT TCCAAGACAT
TATCAAATAA TCGAGGAAAT AAACGCAAGA TTTTTGAAAG AAGTCGGAGA AAAATTCAAC
AATAATCTGA AAAAAATTAT AGATATGTCC ATATTTGAAG AAGGAAACAT AAAGAAGGTA
AGAATGGCTA ATCTCTCATC TGTAGTTTCG TTCTCAATTA ACGGTGTTTC TGAATTGCAT
ACCGAAATAC TTAAAAAAAG TGTTTTAAAA GATTTTTATG AAATGTACCC TGAGAAGTTC
AATAATAAAA CAAATGGAGT AACTCAAAGA AGATGGCTCT TGGAATGTAA TCCACCACTT
GCGAAACTCA TTACCGAAAG TATAGGTAAT GGGTGGATAA CAAACCTTTA CGAATTGAGA
AAACTAGAAA CATTTTTAAA CGATAGTGAA TTTCTTAAAA AACTTGCCGA AGCAAAAAGA
TGGAATAAAG AACGATTAGC AAATTACATC CGTGAGAAAC TAGATATATC CGTTGACCCA
TCCACGCTAT TTGATATACA AGTTAAAAGG ATCCATGAGT ACAAAAGACA ATTATTAAAT
GTTTTACACA TAATACACCT ATACAACGAA ATCTTAGATG GGAAAAAGCC GGAAGTTCCG
AGAACATTCA TATTCGCAGG TAAATCCGCT CCAGGATACA GAATGGCAAA GCTTATAATC
AAACTCATCA ACAGTGTTGC GGAAGTTGTA AATAGAAACC CAATTGTCAA TAAACACCTG
AAAGTTGTAT TTATACCTAA CTATAACGTC TCAGCTGCAC AGATTATTAT TCCCGCTGCA
AATATCAGTG AGCAAATTTC CACGGCGGGA ACGGAAGCTT CTGGAACCGG GAACATGAAA
TTCATGATAA ATGGAGCGCT CACATTAGGA ACATTAGATG GCGCAAATAT AGAAATCCTA
GAAGAAGTAG GCGAAGAAAA CATATTTATC TTTGGACTTA AAGCCGAAGA AATAGAAGAA
GCAAGAAGGA AAGGAATTTA CAACCCGTTT GGAATTTACT TAGAAAACGA AAAAATTAGG
AAAGTGCTTG ACATGATTAG GGGTGGATAC TTCACACCAA ATGAACCAGA GTTATTTGTA
GATATATACG AATCTTTGCT TTACGGAAAA CATGCTCCAA TGCCAGACCA ATACTTCTTA
CTCGCAGACT TTGAGTCATA TGAAAAAGCT CACAAAGACG TGGAAAAATT GTATCTTAAC
CAAGAAGAAT GGAACAAAAA ATCCTTGCTC AACATAGCAA GAAGTGGGAA GTTCTCAAGC
GATAGGACTA TAGAAGAATA CGTTAGGGAT ATATGGAAGA CAAAGAAAGT TGATTAA
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| Protein sequence | MAKNSKIDIT NQFTYHLNHT LAENKDFSTT LQKFFALSYS IRDIVAEKWL RTEEIIHQRK
DLRIVNYLSM EFLIGRLLYN NILNLQVEDE VKALLKKFDL DLDKIALLEE DAALGNGGLG
RLAACFLDSL ATLGYLSYGY TIRYQYGLFK QTIENGFQKE MPDDWLKNGY PWEFPKPEEA
VTVKFFGRSE PYTDEKGNIR FKWVDTYDIL AVPYDIYITG YNSDIVSVLR LWHPKAINEF
NFAEFEKGNY EKAVYEKNLA ETLCKVLYPN DAFYQGRELR LKQEHFFVSA ALQDIIRRHK
RRFGNDLSNL HESEVIQLND THPALAIPEL MRILLDEEGY GWDDAWNIVK NTIAYTNHTV
MPEALEKWEA PLLQNLLPRH YQIIEEINAR FLKEVGEKFN NNLKKIIDMS IFEEGNIKKV
RMANLSSVVS FSINGVSELH TEILKKSVLK DFYEMYPEKF NNKTNGVTQR RWLLECNPPL
AKLITESIGN GWITNLYELR KLETFLNDSE FLKKLAEAKR WNKERLANYI REKLDISVDP
STLFDIQVKR IHEYKRQLLN VLHIIHLYNE ILDGKKPEVP RTFIFAGKSA PGYRMAKLII
KLINSVAEVV NRNPIVNKHL KVVFIPNYNV SAAQIIIPAA NISEQISTAG TEASGTGNMK
FMINGALTLG TLDGANIEIL EEVGEENIFI FGLKAEEIEE ARRKGIYNPF GIYLENEKIR
KVLDMIRGGY FTPNEPELFV DIYESLLYGK HAPMPDQYFL LADFESYEKA HKDVEKLYLN
QEEWNKKSLL NIARSGKFSS DRTIEEYVRD IWKTKKVD
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