Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1427 |
Symbol | |
ID | 5452729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1545343 |
End bp | 1547868 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640875200 |
Product | pullulanase, type I |
Protein accession | YP_001410928 |
Protein GI | 154250103 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02104] pullulanase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.671793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAATT TTTCTAAGAA AGCTCTTGTT TTTCTATTTT TATTAGCTGT TGTTTTCTCA TACGCAGCAA CAGAACTGGT CATCCATTAT CATCGCTGGG ATGGTAATTA CGATGGTTGG AACCTATGGA TTTGGTGGGT AGAGCCTATC TCTAAAGACG GCGCGGCATA TCAATTTACT GAAAAAGATG ATTTCGGTGT CGTAGCAAGA GTTAAATTCG ACGAAACTTT GACAAAAGTT GGAATCATTG TTAGACTTAA TGAATGGAAG GAAAAAGATG TTGCGATGGA TAGATTTATA TCGATAAAAG ATGGAAAAGC GGAGGTGTGG TTGTTGCAAG GTATCGAACA GATATACACA ACAAAGCCAG ATACAAGCCC AAGAGTACTT TTCGCTCAAG CTAGAGCACA GGATGTTATC GAAGCTTACT TAACAGGACA AGTTGATACT ACAAAAGTTA GCGCAAAAGT TACAGTCGAC GGTGTTGAAA GAAAAGTTGC AAAGGTTGAA AAAGCAAATC CAACGGATAT ATCAAAAACA AACCACGTAA AAATCACTCT TGCTGAACCA ATAAAGCTTG ACGAAGTCAA CAAAGATGTC CAAGTTGAAA TCGAAGGCTA CAAACCAGCA AGAGTAATCA TGATGGAAAT CTTAGACAAA ATATACTACG ATGGTCCACT TGGTTTTGAG TATTCTCCAA CTAAAACTAC AATCAGAGTA TGGTCTCCTG TCTCAAAGAC AGTAGATTTA CTACTTTACA AAAATTGGGA TGACAAAGAA CCTACAAAAG TCGTACCTAT GAAATACATC GGAAATGGCG CGTGGGAAGC CGTTCTCGAT GGTGATTGGG AAGGTTGGTT CTATAGAATA AGATATTTCA GTTACGGAGA GTATAGGGAA GGAGTAGATT ACTTCTCCAA AGCAGTCACG AAAAACTCTG CAAAGAGCGC AATCATAGAT CTGAAAAAGA CAAACCCATC TGACTGGGAT AAAGATGTAA GACCAACCAT GAAAGCTCTT GAAGACGCTA TAATCTACGA AATTCATATT GCAGATATGA CAGGACTTGA CAACTCCAAT GTCAAAAATA AAGCTACATA CCTTGGCCTT ACCGAAAAGG GTACAAGAGG ACCAAATGGC GTTACAACTG GTTTAGACCA CCTTGTTGAA TTAGGCGTTA CGCATGTGCA TATCCTTCCA ATGTTTGATT TCTACACAGG TGATGAATCA GAAAGAGATT TTGAAAAGAG CTACAATTGG GGATACGATC CTTACTTATT CACAGTACCA GAAGGTAGAT ACTCAACAAA CCCAATTGAC CCACACGTTA GGATAAACGA AGTCAAGCAA ATGGTCAAAG CATTACACGA AAATGGAATA AGAGTAATAC TCGATATGGT ATTCCCACAT ACATTTGGTA TCGGCGTTCT TTCACCATTT GACACAGCGG TCCCTTACTA TTTCTACAGA ATCGATAAGA CAGGCGCTTA TTTGAACGAA AGCGGCGTTG GAAATGTCAT GGCAACAGAA AGACCAATGC TTAGAAAATA CGTTATTGAT ACATTGAAGT GGTGGGTATT AGAATACCAT GTTGATGGAT TCAGATTCGA CCAAATGGGT CTCATGGATA AGAAAACAAT GCTAGATTTG GAAAAAGAAT TGCACGCTAT AGATCCAACG ATATTGCTCT ACGGTGAACC ATGGGGTGGT TGGGGTGCTC CAATAAGATT CGGAAAATCA GATGTTGGTG GAACACACAT CGCTGCATTT AACGATGAAT TCAGAGACGC TATGAGGGGT TCCGTGTTCA ACGCAACAGT CAAAGGTTTC TTAATGGGCG CGCTTGCAAA AGAAACAGCG ATCAAACGTG GCGTTGTCGG AAGCATTGAG TACGACGATG TAATAAGAAG CTTTGCAAAA GACCCAGAAG AAACAATTAA TTACGTTGCA TGCCATGATA ACCACACACT TTGGGATAAA AATTACTTAG CAGCTCAAGC AGATACAAAC ATAAAATGGA CAGAAGAAAT GCTCAAAAAC GCTCAAAAAT TAGCTGGAGC CATACTATTA ACTTCTCAAG GTATACCATT CTTACACGCT GGCCAAGATT TTGCAAGAAC CAAAAAAGGT GATGAAAATT CATATAACTC ACCAATTTCA ATAAACGGTC TTGATTATGC AAGAAAAGCA GAATTCATAG ATGTCTTCAA TTACTACAAA GGACTCATAG AAATCAGAAA AGCTCATCCA GCATTCAGAC AAAGAACAGC AGATGATATA AAAAAGAAAA TCACATTTTT GCCAACCACA AGGAAAATGG TTGCCTTTAC AATCAAAGAT GAAAACGATA GCTGGAAAGA GATACTCGTC ATATACAACG GTGATACAAA AGACCAAGAT TTTACATTAC CAGAAGGCAC ATGGAACGTA GTAGTCGACC AACAAAACGC AGGTACAAAA GTATTGTATC AAGTTAGTGG AAAAATAACT GTAAAATCCA TATCCGCGAT GGTAATGTAC AAGTAA
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Protein sequence | MVNFSKKALV FLFLLAVVFS YAATELVIHY HRWDGNYDGW NLWIWWVEPI SKDGAAYQFT EKDDFGVVAR VKFDETLTKV GIIVRLNEWK EKDVAMDRFI SIKDGKAEVW LLQGIEQIYT TKPDTSPRVL FAQARAQDVI EAYLTGQVDT TKVSAKVTVD GVERKVAKVE KANPTDISKT NHVKITLAEP IKLDEVNKDV QVEIEGYKPA RVIMMEILDK IYYDGPLGFE YSPTKTTIRV WSPVSKTVDL LLYKNWDDKE PTKVVPMKYI GNGAWEAVLD GDWEGWFYRI RYFSYGEYRE GVDYFSKAVT KNSAKSAIID LKKTNPSDWD KDVRPTMKAL EDAIIYEIHI ADMTGLDNSN VKNKATYLGL TEKGTRGPNG VTTGLDHLVE LGVTHVHILP MFDFYTGDES ERDFEKSYNW GYDPYLFTVP EGRYSTNPID PHVRINEVKQ MVKALHENGI RVILDMVFPH TFGIGVLSPF DTAVPYYFYR IDKTGAYLNE SGVGNVMATE RPMLRKYVID TLKWWVLEYH VDGFRFDQMG LMDKKTMLDL EKELHAIDPT ILLYGEPWGG WGAPIRFGKS DVGGTHIAAF NDEFRDAMRG SVFNATVKGF LMGALAKETA IKRGVVGSIE YDDVIRSFAK DPEETINYVA CHDNHTLWDK NYLAAQADTN IKWTEEMLKN AQKLAGAILL TSQGIPFLHA GQDFARTKKG DENSYNSPIS INGLDYARKA EFIDVFNYYK GLIEIRKAHP AFRQRTADDI KKKITFLPTT RKMVAFTIKD ENDSWKEILV IYNGDTKDQD FTLPEGTWNV VVDQQNAGTK VLYQVSGKIT VKSISAMVMY K
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