Gene Fnod_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1427 
Symbol 
ID5452729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1545343 
End bp1547868 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content39% 
IMG OID640875200 
Productpullulanase, type I 
Protein accessionYP_001410928 
Protein GI154250103 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02104] pullulanase, type I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.671793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAATT TTTCTAAGAA AGCTCTTGTT TTTCTATTTT TATTAGCTGT TGTTTTCTCA 
TACGCAGCAA CAGAACTGGT CATCCATTAT CATCGCTGGG ATGGTAATTA CGATGGTTGG
AACCTATGGA TTTGGTGGGT AGAGCCTATC TCTAAAGACG GCGCGGCATA TCAATTTACT
GAAAAAGATG ATTTCGGTGT CGTAGCAAGA GTTAAATTCG ACGAAACTTT GACAAAAGTT
GGAATCATTG TTAGACTTAA TGAATGGAAG GAAAAAGATG TTGCGATGGA TAGATTTATA
TCGATAAAAG ATGGAAAAGC GGAGGTGTGG TTGTTGCAAG GTATCGAACA GATATACACA
ACAAAGCCAG ATACAAGCCC AAGAGTACTT TTCGCTCAAG CTAGAGCACA GGATGTTATC
GAAGCTTACT TAACAGGACA AGTTGATACT ACAAAAGTTA GCGCAAAAGT TACAGTCGAC
GGTGTTGAAA GAAAAGTTGC AAAGGTTGAA AAAGCAAATC CAACGGATAT ATCAAAAACA
AACCACGTAA AAATCACTCT TGCTGAACCA ATAAAGCTTG ACGAAGTCAA CAAAGATGTC
CAAGTTGAAA TCGAAGGCTA CAAACCAGCA AGAGTAATCA TGATGGAAAT CTTAGACAAA
ATATACTACG ATGGTCCACT TGGTTTTGAG TATTCTCCAA CTAAAACTAC AATCAGAGTA
TGGTCTCCTG TCTCAAAGAC AGTAGATTTA CTACTTTACA AAAATTGGGA TGACAAAGAA
CCTACAAAAG TCGTACCTAT GAAATACATC GGAAATGGCG CGTGGGAAGC CGTTCTCGAT
GGTGATTGGG AAGGTTGGTT CTATAGAATA AGATATTTCA GTTACGGAGA GTATAGGGAA
GGAGTAGATT ACTTCTCCAA AGCAGTCACG AAAAACTCTG CAAAGAGCGC AATCATAGAT
CTGAAAAAGA CAAACCCATC TGACTGGGAT AAAGATGTAA GACCAACCAT GAAAGCTCTT
GAAGACGCTA TAATCTACGA AATTCATATT GCAGATATGA CAGGACTTGA CAACTCCAAT
GTCAAAAATA AAGCTACATA CCTTGGCCTT ACCGAAAAGG GTACAAGAGG ACCAAATGGC
GTTACAACTG GTTTAGACCA CCTTGTTGAA TTAGGCGTTA CGCATGTGCA TATCCTTCCA
ATGTTTGATT TCTACACAGG TGATGAATCA GAAAGAGATT TTGAAAAGAG CTACAATTGG
GGATACGATC CTTACTTATT CACAGTACCA GAAGGTAGAT ACTCAACAAA CCCAATTGAC
CCACACGTTA GGATAAACGA AGTCAAGCAA ATGGTCAAAG CATTACACGA AAATGGAATA
AGAGTAATAC TCGATATGGT ATTCCCACAT ACATTTGGTA TCGGCGTTCT TTCACCATTT
GACACAGCGG TCCCTTACTA TTTCTACAGA ATCGATAAGA CAGGCGCTTA TTTGAACGAA
AGCGGCGTTG GAAATGTCAT GGCAACAGAA AGACCAATGC TTAGAAAATA CGTTATTGAT
ACATTGAAGT GGTGGGTATT AGAATACCAT GTTGATGGAT TCAGATTCGA CCAAATGGGT
CTCATGGATA AGAAAACAAT GCTAGATTTG GAAAAAGAAT TGCACGCTAT AGATCCAACG
ATATTGCTCT ACGGTGAACC ATGGGGTGGT TGGGGTGCTC CAATAAGATT CGGAAAATCA
GATGTTGGTG GAACACACAT CGCTGCATTT AACGATGAAT TCAGAGACGC TATGAGGGGT
TCCGTGTTCA ACGCAACAGT CAAAGGTTTC TTAATGGGCG CGCTTGCAAA AGAAACAGCG
ATCAAACGTG GCGTTGTCGG AAGCATTGAG TACGACGATG TAATAAGAAG CTTTGCAAAA
GACCCAGAAG AAACAATTAA TTACGTTGCA TGCCATGATA ACCACACACT TTGGGATAAA
AATTACTTAG CAGCTCAAGC AGATACAAAC ATAAAATGGA CAGAAGAAAT GCTCAAAAAC
GCTCAAAAAT TAGCTGGAGC CATACTATTA ACTTCTCAAG GTATACCATT CTTACACGCT
GGCCAAGATT TTGCAAGAAC CAAAAAAGGT GATGAAAATT CATATAACTC ACCAATTTCA
ATAAACGGTC TTGATTATGC AAGAAAAGCA GAATTCATAG ATGTCTTCAA TTACTACAAA
GGACTCATAG AAATCAGAAA AGCTCATCCA GCATTCAGAC AAAGAACAGC AGATGATATA
AAAAAGAAAA TCACATTTTT GCCAACCACA AGGAAAATGG TTGCCTTTAC AATCAAAGAT
GAAAACGATA GCTGGAAAGA GATACTCGTC ATATACAACG GTGATACAAA AGACCAAGAT
TTTACATTAC CAGAAGGCAC ATGGAACGTA GTAGTCGACC AACAAAACGC AGGTACAAAA
GTATTGTATC AAGTTAGTGG AAAAATAACT GTAAAATCCA TATCCGCGAT GGTAATGTAC
AAGTAA
 
Protein sequence
MVNFSKKALV FLFLLAVVFS YAATELVIHY HRWDGNYDGW NLWIWWVEPI SKDGAAYQFT 
EKDDFGVVAR VKFDETLTKV GIIVRLNEWK EKDVAMDRFI SIKDGKAEVW LLQGIEQIYT
TKPDTSPRVL FAQARAQDVI EAYLTGQVDT TKVSAKVTVD GVERKVAKVE KANPTDISKT
NHVKITLAEP IKLDEVNKDV QVEIEGYKPA RVIMMEILDK IYYDGPLGFE YSPTKTTIRV
WSPVSKTVDL LLYKNWDDKE PTKVVPMKYI GNGAWEAVLD GDWEGWFYRI RYFSYGEYRE
GVDYFSKAVT KNSAKSAIID LKKTNPSDWD KDVRPTMKAL EDAIIYEIHI ADMTGLDNSN
VKNKATYLGL TEKGTRGPNG VTTGLDHLVE LGVTHVHILP MFDFYTGDES ERDFEKSYNW
GYDPYLFTVP EGRYSTNPID PHVRINEVKQ MVKALHENGI RVILDMVFPH TFGIGVLSPF
DTAVPYYFYR IDKTGAYLNE SGVGNVMATE RPMLRKYVID TLKWWVLEYH VDGFRFDQMG
LMDKKTMLDL EKELHAIDPT ILLYGEPWGG WGAPIRFGKS DVGGTHIAAF NDEFRDAMRG
SVFNATVKGF LMGALAKETA IKRGVVGSIE YDDVIRSFAK DPEETINYVA CHDNHTLWDK
NYLAAQADTN IKWTEEMLKN AQKLAGAILL TSQGIPFLHA GQDFARTKKG DENSYNSPIS
INGLDYARKA EFIDVFNYYK GLIEIRKAHP AFRQRTADDI KKKITFLPTT RKMVAFTIKD
ENDSWKEILV IYNGDTKDQD FTLPEGTWNV VVDQQNAGTK VLYQVSGKIT VKSISAMVMY
K