Gene Fnod_1416 details

Gene Information

• Locus tag: Fnod_1416
• ID: 5452630
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1533649
• End bp: 1534242
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640875189
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_001410917
• Protein GI: 154250092
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCACAG GGATAATACA AAAGGTAGCA AAGGGAGTTT TGGTGGGGAA TAGGTTGAAA 
ATTGAGCGTT GTTGGGGAGA TTTATCACTG GGAGAGAGTA TTGCCATTAA CGGTGTTTGT 
CTTACACTTA CAGATTTTGA CGATTCGTTT ATGTATTTCG ATGTTGGGGC GGAAACGTTG 
AAGTTAACTA ATATTAAATA CGAGAAGTTA TTTAATTTGG AAAGGGCTTT GAAACTTGGA 
GATTCTGTTT CTGGACATTT TGTGACTGGT CATGTCGATG GTATGGTGAA GCTTATAGCT 
AAGCATATAT ACGATAAAAC ATTGTATCTT ACTTTCTCAA TGCCAAAGGA AAGATGGGGA 
GTTGTTAAGA AAGGTTCTAT AGCTTTGAAC GGAGTTAGTC TTACTATCGC GAATGCATCT 
CTTGATACTT TTACTGTTCA ACTTATACCA CACACAATAG AAAATACGAC GTTTAAATTT 
ATTACCTCTG GTTCCTATGT CAACTATGAG ATTGATGTAT TAGCAAGGTT TATTCATAAT 
GAATTAAATA ATCTTGAGAA GGGGTATAAG GATGGGATGA TGTATGAGTA TTGA 

 

Protein sequence

MFTGIIQKVA KGVLVGNRLK IERCWGDLSL GESIAINGVC LTLTDFDDSF MYFDVGAETL 
KLTNIKYEKL FNLERALKLG DSVSGHFVTG HVDGMVKLIA KHIYDKTLYL TFSMPKERWG 
VVKKGSIALN GVSLTIANAS LDTFTVQLIP HTIENTTFKF ITSGSYVNYE IDVLARFIHN 
ELNNLEKGYK DGMMYEY