| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1415 |
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| Symbol | |
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| ID | 5451988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1532567 |
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| End bp | 1533664 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640875188 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001410916 |
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| Protein GI | 154250091 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTTTTC TGAACGAAGA TAAGGTTCAT GAAAGATTTA TGAAACTTGC CATAGTTATT
GCAAAGAAAG GTATTGGGTT TGTAAATCCT AACCCACCTG TTGGTGCCGT TATTGTTAAA
GACGGTAAGA TTTTGAGTAT GGGATATCAC AAATACTATG GTGGGTACCA TGCTGAAAGG
GATGCGATAT TGTCTGCTTT AAACGCAGGG ATTGATATTT CCGGTTCAAC TATGTACGTA
ACTCTTGAAC CGTGCGACCA CTATGGCAAG ACACCACCGT GTACCGATTT GATAATTCAG
TCTGGAATAA AGGAGGTTTA CATAGCTTGC ACGGACCCTA ATCCAATTAG TGGAAACGGT
GCTGAGAAAT TGCGAAAAAA TGGTGTGGAT GTGCACATCG GCTTACTCGA GGAAGAAGCG
AGAGAATTGG CAAAGTTCTT TTTTAAGTCC GTTGAGACTG GGATTCCATA TGTTACGTTA
AAATACGCTG CTACGCTTGA TGGGAAAATC GCGGATGTTA ACGGAAACTC TAAATGGATT
ACAGATGAGT TGAGGAAGGT TGTTCACAAA TTGAGAAGTG AACATATGGC GGTTTTAGTG
GGCGCAGGTA CGGTTATTAA AGATAATCCG ACGCTCAACG TTAGGTTTTT AAAAAGCAAG
AAGAGGAATC CTATAAAAGT TGTGCTTGAT AAAAGAGGTG TTATTTTTGA AAAGATAAAA
GATTTGAACG TATTTCAAGG CGAAAAGGTG ATTGTTTTTA CGGAAAAGCA AGTGAGTGCT
CCTGAGCTCA ATGGAGTGAA TGGAGTGAAG ATATTTAATG TTTTGGAACC GATTGAGATT
CTTAAGACAC TTTACAAGGA AGAACGTGTA GATTCTGTGC TAGTAGAAGG TGGGAGCGAG
ATTTTCAGCC AATTTTTGCC CTTTGCCGAT GAGATTTATG GTTTTTACGG ATTGAAAGCT
TTGGGTAAAG GTAAAGGTAT TTTTGAAAAT ATAGTGAATT TTATAGATTC CCCTTTCGAT
TTTTCGATTA AGCATTTTAA AGTTTCGAAG AATAAGAAAG AATTCTTGGT GGTGATGAAG
AGATGTTCAC AGGGATAA
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| Protein sequence | MIFLNEDKVH ERFMKLAIVI AKKGIGFVNP NPPVGAVIVK DGKILSMGYH KYYGGYHAER
DAILSALNAG IDISGSTMYV TLEPCDHYGK TPPCTDLIIQ SGIKEVYIAC TDPNPISGNG
AEKLRKNGVD VHIGLLEEEA RELAKFFFKS VETGIPYVTL KYAATLDGKI ADVNGNSKWI
TDELRKVVHK LRSEHMAVLV GAGTVIKDNP TLNVRFLKSK KRNPIKVVLD KRGVIFEKIK
DLNVFQGEKV IVFTEKQVSA PELNGVNGVK IFNVLEPIEI LKTLYKEERV DSVLVEGGSE
IFSQFLPFAD EIYGFYGLKA LGKGKGIFEN IVNFIDSPFD FSIKHFKVSK NKKEFLVVMK
RCSQG
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