| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1390 |
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| Symbol | |
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| ID | 5453224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1500663 |
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| End bp | 1501391 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640875165 |
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| Product | CRISPR-associated RAMP Csm3 family protein |
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| Protein accession | YP_001410893 |
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| Protein GI | 154250068 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTAA AATCTTTCAA AGGTAAATAC ATTGTCAAGG CTGATATAAG ACTCATAACA
GGGTTGCACA TAGGCACGAG TAAAGATGAC CTTGAAATAG GAGGACTTGA TAACCCAGTC
ATCAAAGATC CCGAAGGAAA ACCATACATC CCAGGTAGCA CACTAAAAGG AAAACTAAGG
GTGTTAAGTG AGTTCTTCAA CGGAAAAGTG GATGAATCTG GTAAACCTCA CGCATGTGAT
GATGAGAAAT GTGTCGTGTG TGGACTATTC GGTACAGGAA TTCTTAGAAC AGAGAGCAAA
ACACTTTATT TGAGAAGGCT CATAGTTAGA GATGCATACA TAGATCCAGA ATCTTTGAAA
GACCTGGAGG AATACTTGGA AACAAAATGG ACAGAGGTGA AACACGAAAA CATGATAAAC
AGACTAACAT CAAGGGCTAA TCCTCGACCT CAGGAGCGAG TTCCGGCAGG GGCAGTTTTC
AAGGCAGAGT TTGTAGTCAA TATATTTGAA GGAGACAACG AGGACTACCT GAATGAACTC
TTGAAAATAA TGAAACTCTT GGAAGATGAT TACATAGGTG GCAGTGGTTC AAGAGGTTAC
GGAAAAATAA AATTCGAGAA CATAAAAATA ATCAAAAGAG AAAAGGATTA CTACACTGGA
GATAAAGAAG AGAGAACGAT TAAGGAGATC AAATGTTTAG AGGACGTGGC GATTAAGAGT
TCACACTAA
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| Protein sequence | MAVKSFKGKY IVKADIRLIT GLHIGTSKDD LEIGGLDNPV IKDPEGKPYI PGSTLKGKLR
VLSEFFNGKV DESGKPHACD DEKCVVCGLF GTGILRTESK TLYLRRLIVR DAYIDPESLK
DLEEYLETKW TEVKHENMIN RLTSRANPRP QERVPAGAVF KAEFVVNIFE GDNEDYLNEL
LKIMKLLEDD YIGGSGSRGY GKIKFENIKI IKREKDYYTG DKEERTIKEI KCLEDVAIKS
SH
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